Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.53■□□□□ 0.08
P04436 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
P04436 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
P04436 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
P04436 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
P04436 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
P04436 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
P04436 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
P04436 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
P04436 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
P04436 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.53■□□□□ 0.08
P04436 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
P04436 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
P04436 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
P04436 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
P04436 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.52■□□□□ 0.08
P04436 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
P04436 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
P04436 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
P04436 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
P04436 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
P04436 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
P04436 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
P04436 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.52■□□□□ 0.08
P04436 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
P04436 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
P04436 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
P04436 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.52■□□□□ 0.08
P04436 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
P04436 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
P04436 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
P04436 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
P04436 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.52■□□□□ 0.08
P04436 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
P04436 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.52■□□□□ 0.08
P04436 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.52■□□□□ 0.08
P04436 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.52■□□□□ 0.08
P04436 AC107918.2-201ENST00000530817 355 ntBASIC15.52■□□□□ 0.08
P04436 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.52■□□□□ 0.08
P04436 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.52■□□□□ 0.08
P04436 AL691403.2-201ENST00000618460 490 ntBASIC15.52■□□□□ 0.08
P04436 AC079781.4-201ENST00000641908 219 ntBASIC15.52■□□□□ 0.08
P04436 AL645728.2-201ENST00000641974 660 ntBASIC15.52■□□□□ 0.08
P04436 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
P04436 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
P04436 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
P04436 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
P04436 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
P04436 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
P04436 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
P04436 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
P04436 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
P04436 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.52■□□□□ 0.07
P04436 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
P04436 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
P04436 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
P04436 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.51■□□□□ 0.07
P04436 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
P04436 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
P04436 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
P04436 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
P04436 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
P04436 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
P04436 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
P04436 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.51■□□□□ 0.07
P04436 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.51■□□□□ 0.07
P04436 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
P04436 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.51■□□□□ 0.07
P04436 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
P04436 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.51■□□□□ 0.07
P04436 AC068137.2-201ENST00000605408 478 ntBASIC15.51■□□□□ 0.07
P04436 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
P04436 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
P04436 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.51■□□□□ 0.07
P04436 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
P04436 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
P04436 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.51■□□□□ 0.07
P04436 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.51■□□□□ 0.07
P04436 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
P04436 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.51■□□□□ 0.07
P04436 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
P04436 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
P04436 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.51■□□□□ 0.07
P04436 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
P04436 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.51■□□□□ 0.07
P04436 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
P04436 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.51■□□□□ 0.07
P04436 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
P04436 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04436 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.5■□□□□ 0.07
P04436 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04436 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04436 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.5■□□□□ 0.07
P04436 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.5■□□□□ 0.07
P04436 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.5■□□□□ 0.07
P04436 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
P04436 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
P04436 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
P04436 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
P04436 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms