Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC012313.1-201ENST00000593393 3059 ntBASIC20.25■□□□□ 0.83
MBD4O95243 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
MBD4O95243 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
MBD4O95243 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.25■□□□□ 0.83
MBD4O95243 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
MBD4O95243 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MBD4O95243 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
MBD4O95243 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
MBD4O95243 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.24■□□□□ 0.83
MBD4O95243 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MBD4O95243 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MBD4O95243 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MBD4O95243 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.24■□□□□ 0.83
MBD4O95243 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.24■□□□□ 0.83
MBD4O95243 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.24■□□□□ 0.83
MBD4O95243 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.24■□□□□ 0.83
MBD4O95243 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
MBD4O95243 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MBD4O95243 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20.24■□□□□ 0.83
MBD4O95243 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MBD4O95243 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.24■□□□□ 0.83
MBD4O95243 HTR5BP-201ENST00000430851 1154 ntBASIC20.24■□□□□ 0.83
MBD4O95243 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MBD4O95243 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
MBD4O95243 AL031432.2-201ENST00000566714 459 ntBASIC20.24■□□□□ 0.83
MBD4O95243 AC005829.1-201ENST00000570002 483 ntBASIC20.24■□□□□ 0.83
MBD4O95243 AL928711.1-201ENST00000570165 459 ntBASIC20.24■□□□□ 0.83
MBD4O95243 AP002472.1-201ENST00000577490 586 ntBASIC20.24■□□□□ 0.83
MBD4O95243 AC091167.2-201ENST00000579581 588 ntBASIC20.24■□□□□ 0.83
MBD4O95243 MPDU1-223ENST00000582151 728 ntBASIC20.24■□□□□ 0.83
MBD4O95243 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MBD4O95243 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.24■□□□□ 0.83
MBD4O95243 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MBD4O95243 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MBD4O95243 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MBD4O95243 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MBD4O95243 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MBD4O95243 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MBD4O95243 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
MBD4O95243 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MBD4O95243 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MBD4O95243 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MBD4O95243 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MBD4O95243 AC012569.1-201ENST00000591191 1524 ntBASIC20.23■□□□□ 0.83
MBD4O95243 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MBD4O95243 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.23■□□□□ 0.83
MBD4O95243 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MBD4O95243 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
MBD4O95243 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.23■□□□□ 0.83
MBD4O95243 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
MBD4O95243 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MBD4O95243 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.23■□□□□ 0.83
MBD4O95243 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.23■□□□□ 0.83
MBD4O95243 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MBD4O95243 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MBD4O95243 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
MBD4O95243 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MBD4O95243 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.23■□□□□ 0.83
MBD4O95243 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
MBD4O95243 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
MBD4O95243 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
MBD4O95243 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MBD4O95243 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MBD4O95243 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MBD4O95243 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MBD4O95243 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
MBD4O95243 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MBD4O95243 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.22■□□□□ 0.83
MBD4O95243 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MBD4O95243 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
MBD4O95243 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MBD4O95243 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MBD4O95243 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.22■□□□□ 0.83
MBD4O95243 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MBD4O95243 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.22■□□□□ 0.83
MBD4O95243 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.22■□□□□ 0.83
MBD4O95243 YBX1P5-201ENST00000509441 847 ntBASIC20.22■□□□□ 0.83
MBD4O95243 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.22■□□□□ 0.83
MBD4O95243 MIR4469-201ENST00000583919 79 ntBASIC20.22■□□□□ 0.83
MBD4O95243 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.22■□□□□ 0.83
MBD4O95243 AL691403.2-201ENST00000618460 490 ntBASIC20.22■□□□□ 0.83
MBD4O95243 AL121761.2-201ENST00000598007 1648 ntBASIC20.22■□□□□ 0.83
MBD4O95243 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
MBD4O95243 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MBD4O95243 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MBD4O95243 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MBD4O95243 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MBD4O95243 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
MBD4O95243 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MBD4O95243 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
MBD4O95243 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MBD4O95243 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MBD4O95243 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MBD4O95243 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MBD4O95243 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MBD4O95243 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MBD4O95243 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.21■□□□□ 0.83
MBD4O95243 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MBD4O95243 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.21■□□□□ 0.83
MBD4O95243 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms