Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT1O95170 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT1O95170 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
CDRT1O95170 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT1O95170 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT1O95170 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT1O95170 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CDRT1O95170 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT1O95170 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT1O95170 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT1O95170 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDRT1O95170 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.25■□□□□ 0.03
CDRT1O95170 HLA-A-202ENST00000376806 1854 ntBASIC15.25■□□□□ 0.03
CDRT1O95170 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.25■□□□□ 0.03
CDRT1O95170 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CDRT1O95170 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT1O95170 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CDRT1O95170 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT1O95170 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT1O95170 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.24■□□□□ 0.03
CDRT1O95170 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT1O95170 FLJ16779-201ENST00000612722 7638 ntBASIC15.24■□□□□ 0.03
CDRT1O95170 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CDRT1O95170 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.24■□□□□ 0.03
CDRT1O95170 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT1O95170 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT1O95170 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT1O95170 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.24■□□□□ 0.03
CDRT1O95170 ECEL1P3-201ENST00000427961 737 ntBASIC15.24■□□□□ 0.03
CDRT1O95170 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.24■□□□□ 0.03
CDRT1O95170 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.24■□□□□ 0.03
CDRT1O95170 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT1O95170 AC104640.1-201ENST00000562617 2109 ntBASIC15.24■□□□□ 0.03
CDRT1O95170 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.24■□□□□ 0.03
CDRT1O95170 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT1O95170 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
CDRT1O95170 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT1O95170 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDRT1O95170 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT1O95170 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CDRT1O95170 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CDRT1O95170 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT1O95170 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT1O95170 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT1O95170 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDRT1O95170 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.24■□□□□ 0.03
CDRT1O95170 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CDRT1O95170 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT1O95170 AC068587.6-202ENST00000641839 5619 ntBASIC15.24■□□□□ 0.03
CDRT1O95170 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT1O95170 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDRT1O95170 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT1O95170 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT1O95170 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT1O95170 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT1O95170 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CDRT1O95170 ALOX12P2-203ENST00000570921 1945 ntBASIC15.23■□□□□ 0.03
CDRT1O95170 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
CDRT1O95170 AC092384.3-202ENST00000564646 2873 ntBASIC15.23■□□□□ 0.03
CDRT1O95170 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.23■□□□□ 0.03
CDRT1O95170 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT1O95170 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.23■□□□□ 0.03
CDRT1O95170 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.23■□□□□ 0.03
CDRT1O95170 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT1O95170 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT1O95170 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT1O95170 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT1O95170 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.23■□□□□ 0.03
CDRT1O95170 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CDRT1O95170 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.23■□□□□ 0.03
CDRT1O95170 AP000523.1-201ENST00000398242 1049 ntBASIC15.23■□□□□ 0.03
CDRT1O95170 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CDRT1O95170 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.23■□□□□ 0.03
CDRT1O95170 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.23■□□□□ 0.03
CDRT1O95170 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.23■□□□□ 0.03
CDRT1O95170 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT1O95170 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.23■□□□□ 0.03
CDRT1O95170 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CDRT1O95170 AC144831.1-201ENST00000573312 2656 ntBASIC15.23■□□□□ 0.03
CDRT1O95170 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT1O95170 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT1O95170 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT1O95170 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CDRT1O95170 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT1O95170 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.23■□□□□ 0.03
CDRT1O95170 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT1O95170 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT1O95170 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CDRT1O95170 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT1O95170 LINC01568-207ENST00000641790 1380 ntBASIC15.23■□□□□ 0.03
CDRT1O95170 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CDRT1O95170 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.23■□□□□ 0.03
CDRT1O95170 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDRT1O95170 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CDRT1O95170 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.22■□□□□ 0.03
CDRT1O95170 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT1O95170 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT1O95170 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDRT1O95170 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CDRT1O95170 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms