Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL5O76039 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL5O76039 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL5O76039 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL5O76039 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.79■□□□□ 0.76
CDKL5O76039 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.79■□□□□ 0.76
CDKL5O76039 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL5O76039 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CDKL5O76039 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
CDKL5O76039 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.78■□□□□ 0.76
CDKL5O76039 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL5O76039 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CDKL5O76039 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.78■□□□□ 0.76
CDKL5O76039 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL5O76039 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL5O76039 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.78■□□□□ 0.76
CDKL5O76039 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL5O76039 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL5O76039 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL5O76039 AC078925.2-201ENST00000624013 1973 ntBASIC19.78■□□□□ 0.76
CDKL5O76039 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.78■□□□□ 0.76
CDKL5O76039 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
CDKL5O76039 RPS2P28-201ENST00000314255 741 ntBASIC19.78■□□□□ 0.76
CDKL5O76039 KRT18P27-201ENST00000427733 1299 ntBASIC19.78■□□□□ 0.76
CDKL5O76039 KRT18P67-201ENST00000432816 1264 ntBASIC19.78■□□□□ 0.76
CDKL5O76039 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL5O76039 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.78■□□□□ 0.76
CDKL5O76039 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CDKL5O76039 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL5O76039 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL5O76039 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.78■□□□□ 0.76
CDKL5O76039 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL5O76039 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
CDKL5O76039 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL5O76039 PI4KAP1-204ENST00000612579 1703 ntBASIC19.78■□□□□ 0.76
CDKL5O76039 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.78■□□□□ 0.76
CDKL5O76039 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL5O76039 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL5O76039 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL5O76039 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL5O76039 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDKL5O76039 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CDKL5O76039 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CDKL5O76039 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CDKL5O76039 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.77■□□□□ 0.76
CDKL5O76039 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.77■□□□□ 0.76
CDKL5O76039 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CDKL5O76039 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CDKL5O76039 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL5O76039 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL5O76039 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL5O76039 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL5O76039 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL5O76039 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL5O76039 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.77■□□□□ 0.76
CDKL5O76039 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL5O76039 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL5O76039 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CDKL5O76039 AC018712.1-201ENST00000455767 687 ntBASIC19.77■□□□□ 0.76
CDKL5O76039 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CDKL5O76039 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CDKL5O76039 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL5O76039 AC136632.2-201ENST00000512891 861 ntBASIC19.77■□□□□ 0.76
CDKL5O76039 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.77■□□□□ 0.76
CDKL5O76039 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.77■□□□□ 0.76
CDKL5O76039 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.77■□□□□ 0.76
CDKL5O76039 MIR1199-201ENST00000621445 119 ntBASIC19.77■□□□□ 0.76
CDKL5O76039 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.77■□□□□ 0.76
CDKL5O76039 AC008735.5-201ENST00000623544 497 ntBASIC19.77■□□□□ 0.76
CDKL5O76039 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.77■□□□□ 0.76
CDKL5O76039 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL5O76039 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CDKL5O76039 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDKL5O76039 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.77■□□□□ 0.76
CDKL5O76039 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CDKL5O76039 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CDKL5O76039 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CDKL5O76039 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDKL5O76039 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDKL5O76039 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDKL5O76039 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.76■□□□□ 0.75
CDKL5O76039 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CDKL5O76039 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL5O76039 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
CDKL5O76039 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL5O76039 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL5O76039 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CDKL5O76039 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL5O76039 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.76■□□□□ 0.75
CDKL5O76039 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL5O76039 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL5O76039 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CDKL5O76039 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL5O76039 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CDKL5O76039 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.76■□□□□ 0.75
CDKL5O76039 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDKL5O76039 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.76■□□□□ 0.75
CDKL5O76039 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.76■□□□□ 0.75
CDKL5O76039 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.76■□□□□ 0.75
CDKL5O76039 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms