Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 GNAS-203ENST00000306120 1878 ntBASIC16.4■□□□□ 0.22
CPNE3O75131 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE3O75131 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE3O75131 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.4■□□□□ 0.22
CPNE3O75131 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE3O75131 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE3O75131 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CPNE3O75131 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE3O75131 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.4■□□□□ 0.22
CPNE3O75131 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.4■□□□□ 0.22
CPNE3O75131 KRT18P2-201ENST00000447938 1258 ntBASIC16.4■□□□□ 0.22
CPNE3O75131 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.4■□□□□ 0.22
CPNE3O75131 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.4■□□□□ 0.22
CPNE3O75131 AC112482.1-201ENST00000492080 688 ntBASIC16.4■□□□□ 0.22
CPNE3O75131 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE3O75131 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.4■□□□□ 0.22
CPNE3O75131 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.4■□□□□ 0.22
CPNE3O75131 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.4■□□□□ 0.22
CPNE3O75131 AC079781.4-201ENST00000641908 219 ntBASIC16.4■□□□□ 0.22
CPNE3O75131 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CPNE3O75131 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CPNE3O75131 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CPNE3O75131 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE3O75131 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE3O75131 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CPNE3O75131 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE3O75131 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE3O75131 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE3O75131 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE3O75131 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
CPNE3O75131 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE3O75131 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE3O75131 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CPNE3O75131 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE3O75131 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE3O75131 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CPNE3O75131 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE3O75131 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CPNE3O75131 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE3O75131 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
CPNE3O75131 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.39■□□□□ 0.21
CPNE3O75131 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.39■□□□□ 0.21
CPNE3O75131 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CPNE3O75131 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE3O75131 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE3O75131 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CPNE3O75131 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CPNE3O75131 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.39■□□□□ 0.21
CPNE3O75131 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CPNE3O75131 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE3O75131 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE3O75131 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.39■□□□□ 0.21
CPNE3O75131 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
CPNE3O75131 MCCD1P2-201ENST00000423228 335 ntBASIC16.39■□□□□ 0.21
CPNE3O75131 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.39■□□□□ 0.21
CPNE3O75131 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.39■□□□□ 0.21
CPNE3O75131 AC092183.1-201ENST00000469884 875 ntBASIC16.39■□□□□ 0.21
CPNE3O75131 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.39■□□□□ 0.21
CPNE3O75131 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CPNE3O75131 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.39■□□□□ 0.21
CPNE3O75131 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.39■□□□□ 0.21
CPNE3O75131 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
CPNE3O75131 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.39■□□□□ 0.21
CPNE3O75131 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.39■□□□□ 0.21
CPNE3O75131 AC055717.3-201ENST00000622967 595 ntBASIC16.39■□□□□ 0.21
CPNE3O75131 LINC01451-201ENST00000623792 534 ntBASIC16.39■□□□□ 0.21
CPNE3O75131 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CPNE3O75131 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE3O75131 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE3O75131 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CPNE3O75131 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.39■□□□□ 0.21
CPNE3O75131 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.39■□□□□ 0.21
CPNE3O75131 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.39■□□□□ 0.21
CPNE3O75131 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CPNE3O75131 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.39■□□□□ 0.21
CPNE3O75131 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.39■□□□□ 0.21
CPNE3O75131 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.39■□□□□ 0.21
CPNE3O75131 REXO1L11P-201ENST00000620964 1927 ntBASIC16.39■□□□□ 0.21
CPNE3O75131 CICP6-201ENST00000457191 2729 ntBASIC16.39■□□□□ 0.21
CPNE3O75131 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE3O75131 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CPNE3O75131 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE3O75131 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
CPNE3O75131 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE3O75131 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE3O75131 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.38■□□□□ 0.21
CPNE3O75131 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE3O75131 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CPNE3O75131 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE3O75131 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
CPNE3O75131 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE3O75131 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE3O75131 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CPNE3O75131 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CPNE3O75131 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE3O75131 SLC25A6P5-201ENST00000435663 894 ntBASIC16.38■□□□□ 0.21
CPNE3O75131 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE3O75131 AC004967.1-201ENST00000453589 447 ntBASIC16.38■□□□□ 0.21
CPNE3O75131 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CPNE3O75131 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms