Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.84■□□□□ 0.13
PRKNO60260 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PRKNO60260 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRKNO60260 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.84■□□□□ 0.13
PRKNO60260 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PRKNO60260 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKNO60260 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.84■□□□□ 0.13
PRKNO60260 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.84■□□□□ 0.13
PRKNO60260 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKNO60260 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRKNO60260 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKNO60260 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKNO60260 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PRKNO60260 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRKNO60260 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PRKNO60260 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKNO60260 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKNO60260 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.84■□□□□ 0.13
PRKNO60260 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.84■□□□□ 0.13
PRKNO60260 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.84■□□□□ 0.13
PRKNO60260 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.84■□□□□ 0.13
PRKNO60260 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PRKNO60260 AC018845.2-201ENST00000568326 409 ntBASIC15.84■□□□□ 0.13
PRKNO60260 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
PRKNO60260 AC010654.1-201ENST00000615722 808 ntBASIC15.84■□□□□ 0.13
PRKNO60260 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRKNO60260 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PRKNO60260 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKNO60260 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKNO60260 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKNO60260 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKNO60260 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRKNO60260 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.84■□□□□ 0.13
PRKNO60260 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKNO60260 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKNO60260 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKNO60260 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKNO60260 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKNO60260 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.84■□□□□ 0.13
PRKNO60260 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRKNO60260 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRKNO60260 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRKNO60260 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRKNO60260 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.83■□□□□ 0.13
PRKNO60260 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.83■□□□□ 0.13
PRKNO60260 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PRKNO60260 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRKNO60260 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.83■□□□□ 0.13
PRKNO60260 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRKNO60260 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRKNO60260 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PRKNO60260 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
PRKNO60260 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PRKNO60260 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRKNO60260 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PRKNO60260 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKNO60260 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.83■□□□□ 0.12
PRKNO60260 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKNO60260 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.83■□□□□ 0.12
PRKNO60260 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PRKNO60260 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.83■□□□□ 0.12
PRKNO60260 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.83■□□□□ 0.12
PRKNO60260 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKNO60260 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
PRKNO60260 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
PRKNO60260 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.83■□□□□ 0.12
PRKNO60260 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKNO60260 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKNO60260 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.83■□□□□ 0.12
PRKNO60260 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
PRKNO60260 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRKNO60260 FRMD8P1-201ENST00000440433 1524 ntBASIC15.83■□□□□ 0.12
PRKNO60260 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKNO60260 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRKNO60260 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKNO60260 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKNO60260 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRKNO60260 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRKNO60260 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKNO60260 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.82■□□□□ 0.12
PRKNO60260 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKNO60260 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PRKNO60260 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
PRKNO60260 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PRKNO60260 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKNO60260 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.82■□□□□ 0.12
PRKNO60260 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.82■□□□□ 0.12
PRKNO60260 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PRKNO60260 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PRKNO60260 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRKNO60260 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRKNO60260 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRKNO60260 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.82■□□□□ 0.12
PRKNO60260 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PRKNO60260 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PRKNO60260 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
PRKNO60260 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRKNO60260 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PRKNO60260 AC023274.1-201ENST00000418278 595 ntBASIC15.82■□□□□ 0.12
PRKNO60260 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms