Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSSCA1O60232 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSSCA1O60232 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SSSCA1O60232 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.94□□□□□ -0.18
SSSCA1O60232 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSSCA1O60232 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.94□□□□□ -0.18
SSSCA1O60232 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.94□□□□□ -0.18
SSSCA1O60232 CNP-204ENST00000472031 1019 ntTSL 2 BASIC13.94□□□□□ -0.18
SSSCA1O60232 AC034232.1-201ENST00000506026 1064 ntBASIC13.94□□□□□ -0.18
SSSCA1O60232 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSSCA1O60232 EGLN1P1-201ENST00000531623 762 ntBASIC13.94□□□□□ -0.18
SSSCA1O60232 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.94□□□□□ -0.18
SSSCA1O60232 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSSCA1O60232 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.94□□□□□ -0.18
SSSCA1O60232 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SSSCA1O60232 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.94□□□□□ -0.18
SSSCA1O60232 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SSSCA1O60232 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
SSSCA1O60232 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.94□□□□□ -0.18
SSSCA1O60232 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SSSCA1O60232 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.94□□□□□ -0.18
SSSCA1O60232 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSSCA1O60232 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.94□□□□□ -0.18
SSSCA1O60232 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSSCA1O60232 ALOX12P2-203ENST00000570921 1945 ntBASIC13.94□□□□□ -0.18
SSSCA1O60232 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SSSCA1O60232 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSSCA1O60232 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SSSCA1O60232 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSSCA1O60232 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SSSCA1O60232 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.93□□□□□ -0.18
SSSCA1O60232 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSSCA1O60232 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSSCA1O60232 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SSSCA1O60232 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSSCA1O60232 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSSCA1O60232 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.93□□□□□ -0.18
SSSCA1O60232 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.93□□□□□ -0.18
SSSCA1O60232 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.93□□□□□ -0.18
SSSCA1O60232 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSSCA1O60232 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.93□□□□□ -0.18
SSSCA1O60232 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.93□□□□□ -0.18
SSSCA1O60232 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSSCA1O60232 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSSCA1O60232 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
SSSCA1O60232 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSSCA1O60232 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSSCA1O60232 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSSCA1O60232 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.93□□□□□ -0.18
SSSCA1O60232 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
SSSCA1O60232 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC13.93□□□□□ -0.18
SSSCA1O60232 AC096633.1-201ENST00000422446 749 ntBASIC13.93□□□□□ -0.18
SSSCA1O60232 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC13.93□□□□□ -0.18
SSSCA1O60232 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SSSCA1O60232 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC13.93□□□□□ -0.18
SSSCA1O60232 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.93□□□□□ -0.18
SSSCA1O60232 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC13.93□□□□□ -0.18
SSSCA1O60232 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC13.93□□□□□ -0.18
SSSCA1O60232 AC142381.4-202ENST00000563973 229 ntBASIC13.93□□□□□ -0.18
SSSCA1O60232 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.93□□□□□ -0.18
SSSCA1O60232 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.93□□□□□ -0.18
SSSCA1O60232 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SSSCA1O60232 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.93□□□□□ -0.18
SSSCA1O60232 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSSCA1O60232 AC007326.2-201ENST00000624224 7579 ntBASIC13.93□□□□□ -0.18
SSSCA1O60232 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSSCA1O60232 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
SSSCA1O60232 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SSSCA1O60232 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.93□□□□□ -0.18
SSSCA1O60232 AL391256.1-201ENST00000443260 1855 ntBASIC13.93□□□□□ -0.18
SSSCA1O60232 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSSCA1O60232 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.93□□□□□ -0.18
SSSCA1O60232 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SSSCA1O60232 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SSSCA1O60232 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SSSCA1O60232 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SSSCA1O60232 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSSCA1O60232 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSSCA1O60232 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.92□□□□□ -0.18
SSSCA1O60232 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSSCA1O60232 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSSCA1O60232 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.92□□□□□ -0.18
SSSCA1O60232 AL365203.3-201ENST00000609742 2057 ntBASIC13.92□□□□□ -0.18
SSSCA1O60232 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SSSCA1O60232 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.92□□□□□ -0.18
SSSCA1O60232 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSSCA1O60232 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.92□□□□□ -0.18
SSSCA1O60232 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.92□□□□□ -0.18
SSSCA1O60232 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SSSCA1O60232 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.92□□□□□ -0.18
SSSCA1O60232 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSSCA1O60232 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSSCA1O60232 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSSCA1O60232 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
SSSCA1O60232 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SSSCA1O60232 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC13.92□□□□□ -0.18
SSSCA1O60232 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SSSCA1O60232 KRT18P48-201ENST00000434763 852 ntBASIC13.92□□□□□ -0.18
SSSCA1O60232 MTCL1P1-201ENST00000446207 792 ntBASIC13.92□□□□□ -0.18
SSSCA1O60232 UBE2SP1-201ENST00000450587 669 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms