Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KDELR3O43731 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
KDELR3O43731 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KDELR3O43731 AC023274.1-201ENST00000418278 595 ntBASIC17.22■□□□□ 0.35
KDELR3O43731 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
KDELR3O43731 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.22■□□□□ 0.35
KDELR3O43731 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.22■□□□□ 0.35
KDELR3O43731 KRT19P2-202ENST00000557173 1012 ntBASIC17.22■□□□□ 0.35
KDELR3O43731 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.22■□□□□ 0.35
KDELR3O43731 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.22■□□□□ 0.35
KDELR3O43731 AL513190.1-201ENST00000621254 727 ntBASIC17.22■□□□□ 0.35
KDELR3O43731 AL645728.2-201ENST00000641974 660 ntBASIC17.22■□□□□ 0.35
KDELR3O43731 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
KDELR3O43731 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KDELR3O43731 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KDELR3O43731 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
KDELR3O43731 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KDELR3O43731 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.22■□□□□ 0.35
KDELR3O43731 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KDELR3O43731 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.22■□□□□ 0.35
KDELR3O43731 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
KDELR3O43731 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KDELR3O43731 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.22■□□□□ 0.35
KDELR3O43731 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KDELR3O43731 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KDELR3O43731 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KDELR3O43731 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KDELR3O43731 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
KDELR3O43731 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KDELR3O43731 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
KDELR3O43731 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.21■□□□□ 0.35
KDELR3O43731 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KDELR3O43731 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.21■□□□□ 0.35
KDELR3O43731 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.21■□□□□ 0.35
KDELR3O43731 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KDELR3O43731 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KDELR3O43731 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
KDELR3O43731 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
KDELR3O43731 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KDELR3O43731 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.21■□□□□ 0.35
KDELR3O43731 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KDELR3O43731 HCG4-201ENST00000418983 998 ntBASIC17.21■□□□□ 0.35
KDELR3O43731 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.21■□□□□ 0.35
KDELR3O43731 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.21■□□□□ 0.35
KDELR3O43731 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KDELR3O43731 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.21■□□□□ 0.35
KDELR3O43731 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.21■□□□□ 0.35
KDELR3O43731 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.21■□□□□ 0.35
KDELR3O43731 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.21■□□□□ 0.35
KDELR3O43731 MIR4492-201ENST00000581627 80 ntBASIC17.21■□□□□ 0.35
KDELR3O43731 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
KDELR3O43731 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
KDELR3O43731 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KDELR3O43731 AC131009.4-201ENST00000624048 1740 ntBASIC17.21■□□□□ 0.35
KDELR3O43731 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KDELR3O43731 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
KDELR3O43731 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
KDELR3O43731 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
KDELR3O43731 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
KDELR3O43731 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
KDELR3O43731 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
KDELR3O43731 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KDELR3O43731 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
KDELR3O43731 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.2■□□□□ 0.34
KDELR3O43731 AC012313.1-201ENST00000593393 3059 ntBASIC17.2■□□□□ 0.34
KDELR3O43731 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
KDELR3O43731 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
KDELR3O43731 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KDELR3O43731 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KDELR3O43731 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KDELR3O43731 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KDELR3O43731 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.2■□□□□ 0.34
KDELR3O43731 AP002490.2-201ENST00000524791 560 ntBASIC17.2■□□□□ 0.34
KDELR3O43731 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KDELR3O43731 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.2■□□□□ 0.34
KDELR3O43731 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.2■□□□□ 0.34
KDELR3O43731 AL031432.2-201ENST00000566714 459 ntBASIC17.2■□□□□ 0.34
KDELR3O43731 AL928711.1-201ENST00000570165 459 ntBASIC17.2■□□□□ 0.34
KDELR3O43731 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.2■□□□□ 0.34
KDELR3O43731 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.2■□□□□ 0.34
KDELR3O43731 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KDELR3O43731 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
KDELR3O43731 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KDELR3O43731 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KDELR3O43731 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KDELR3O43731 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
KDELR3O43731 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KDELR3O43731 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.2■□□□□ 0.34
KDELR3O43731 AC012569.1-201ENST00000591191 1524 ntBASIC17.2■□□□□ 0.34
KDELR3O43731 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KDELR3O43731 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KDELR3O43731 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.2■□□□□ 0.34
KDELR3O43731 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KDELR3O43731 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
KDELR3O43731 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KDELR3O43731 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.2■□□□□ 0.34
KDELR3O43731 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
KDELR3O43731 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
KDELR3O43731 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KDELR3O43731 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms