Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PROM1O43490 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.19■□□□□ 0.18
PROM1O43490 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PROM1O43490 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PROM1O43490 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.19■□□□□ 0.18
PROM1O43490 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PROM1O43490 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PROM1O43490 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PROM1O43490 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PROM1O43490 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.19■□□□□ 0.18
PROM1O43490 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.19■□□□□ 0.18
PROM1O43490 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.19■□□□□ 0.18
PROM1O43490 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PROM1O43490 KRT18P67-201ENST00000432816 1264 ntBASIC16.19■□□□□ 0.18
PROM1O43490 HNRNPDP1-201ENST00000439535 754 ntBASIC16.19■□□□□ 0.18
PROM1O43490 AC018712.1-201ENST00000455767 687 ntBASIC16.19■□□□□ 0.18
PROM1O43490 AF186996.4-201ENST00000467186 377 ntBASIC16.19■□□□□ 0.18
PROM1O43490 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.19■□□□□ 0.18
PROM1O43490 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.19■□□□□ 0.18
PROM1O43490 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.19■□□□□ 0.18
PROM1O43490 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.19■□□□□ 0.18
PROM1O43490 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PROM1O43490 AC006538.3-201ENST00000612495 578 ntBASIC16.19■□□□□ 0.18
PROM1O43490 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.19■□□□□ 0.18
PROM1O43490 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PROM1O43490 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.19■□□□□ 0.18
PROM1O43490 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PROM1O43490 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PROM1O43490 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PROM1O43490 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PROM1O43490 AC018695.7-201ENST00000624587 2492 ntBASIC16.19■□□□□ 0.18
PROM1O43490 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.19■□□□□ 0.18
PROM1O43490 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.19■□□□□ 0.18
PROM1O43490 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PROM1O43490 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PROM1O43490 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PROM1O43490 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PROM1O43490 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PROM1O43490 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PROM1O43490 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.18■□□□□ 0.18
PROM1O43490 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PROM1O43490 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.18■□□□□ 0.18
PROM1O43490 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PROM1O43490 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.18■□□□□ 0.18
PROM1O43490 AP002414.1-201ENST00000391405 1147 ntBASIC16.18■□□□□ 0.18
PROM1O43490 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PROM1O43490 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.18■□□□□ 0.18
PROM1O43490 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.18■□□□□ 0.18
PROM1O43490 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.18■□□□□ 0.18
PROM1O43490 AL160237.2-201ENST00000556165 472 ntBASIC16.18■□□□□ 0.18
PROM1O43490 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.18■□□□□ 0.18
PROM1O43490 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.18■□□□□ 0.18
PROM1O43490 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.18■□□□□ 0.18
PROM1O43490 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
PROM1O43490 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.18■□□□□ 0.18
PROM1O43490 AC006557.2-201ENST00000592985 1240 ntBASIC16.18■□□□□ 0.18
PROM1O43490 AC023511.2-201ENST00000618803 211 ntBASIC16.18■□□□□ 0.18
PROM1O43490 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PROM1O43490 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PROM1O43490 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.18■□□□□ 0.18
PROM1O43490 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PROM1O43490 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PROM1O43490 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PROM1O43490 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PROM1O43490 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PROM1O43490 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.18■□□□□ 0.18
PROM1O43490 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.18■□□□□ 0.18
PROM1O43490 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
PROM1O43490 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PROM1O43490 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PROM1O43490 AC006504.4-201ENST00000592118 1568 ntBASIC16.17■□□□□ 0.18
PROM1O43490 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PROM1O43490 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PROM1O43490 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.17■□□□□ 0.18
PROM1O43490 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PROM1O43490 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PROM1O43490 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PROM1O43490 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.17■□□□□ 0.18
PROM1O43490 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PROM1O43490 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PROM1O43490 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PROM1O43490 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.17■□□□□ 0.18
PROM1O43490 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.17■□□□□ 0.18
PROM1O43490 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
PROM1O43490 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.17■□□□□ 0.18
PROM1O43490 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PROM1O43490 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.17■□□□□ 0.18
PROM1O43490 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.17■□□□□ 0.18
PROM1O43490 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PROM1O43490 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PROM1O43490 AC009078.2-202ENST00000463353 338 ntBASIC16.17■□□□□ 0.18
PROM1O43490 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PROM1O43490 AP002469.2-201ENST00000531724 424 ntBASIC16.17■□□□□ 0.18
PROM1O43490 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.17■□□□□ 0.18
PROM1O43490 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.17■□□□□ 0.18
PROM1O43490 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.17■□□□□ 0.18
PROM1O43490 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.17■□□□□ 0.18
PROM1O43490 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.17■□□□□ 0.18
PROM1O43490 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.17■□□□□ 0.18
PROM1O43490 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms