Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC28.68■■■□□ 2.18
CUX2O14529 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CUX2O14529 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC28.68■■■□□ 2.18
CUX2O14529 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
CUX2O14529 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CUX2O14529 REXO1L9P-201ENST00000604264 2108 ntBASIC28.68■■■□□ 2.18
CUX2O14529 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC28.67■■■□□ 2.18
CUX2O14529 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CUX2O14529 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CUX2O14529 IGF1-203ENST00000392904 761 ntTSL 5 BASIC28.67■■■□□ 2.18
CUX2O14529 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
CUX2O14529 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CUX2O14529 USB1-202ENST00000423271 1217 ntTSL 2 BASIC28.67■■■□□ 2.18
CUX2O14529 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC28.67■■■□□ 2.18
CUX2O14529 RRP7BP-205ENST00000566851 833 ntBASIC28.67■■■□□ 2.18
CUX2O14529 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CUX2O14529 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CUX2O14529 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC28.67■■■□□ 2.18
CUX2O14529 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CUX2O14529 HNRNPRP1-201ENST00000453465 1695 ntBASIC28.67■■■□□ 2.18
CUX2O14529 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CUX2O14529 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CUX2O14529 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC28.67■■■□□ 2.18
CUX2O14529 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC28.67■■■□□ 2.18
CUX2O14529 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CUX2O14529 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CUX2O14529 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CUX2O14529 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CUX2O14529 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CUX2O14529 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CUX2O14529 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CUX2O14529 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
CUX2O14529 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
CUX2O14529 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC28.66■■■□□ 2.18
CUX2O14529 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC28.66■■■□□ 2.18
CUX2O14529 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC28.66■■■□□ 2.18
CUX2O14529 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC28.66■■■□□ 2.18
CUX2O14529 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CUX2O14529 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CUX2O14529 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CUX2O14529 REXO1L11P-201ENST00000620964 1927 ntBASIC28.66■■■□□ 2.18
CUX2O14529 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC28.66■■■□□ 2.18
CUX2O14529 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
CUX2O14529 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CUX2O14529 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC28.66■■■□□ 2.18
CUX2O14529 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CUX2O14529 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CUX2O14529 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
CUX2O14529 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CUX2O14529 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CUX2O14529 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CUX2O14529 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
CUX2O14529 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC28.66■■■□□ 2.18
CUX2O14529 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CUX2O14529 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC28.66■■■□□ 2.18
CUX2O14529 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC28.66■■■□□ 2.18
CUX2O14529 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC28.66■■■□□ 2.18
CUX2O14529 TEX48-202ENST00000612244 662 ntTSL 3 BASIC28.66■■■□□ 2.18
CUX2O14529 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
CUX2O14529 AL033527.5-201ENST00000641382 801 ntBASIC28.66■■■□□ 2.18
CUX2O14529 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CUX2O14529 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC28.65■■■□□ 2.18
CUX2O14529 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
CUX2O14529 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC28.65■■■□□ 2.18
CUX2O14529 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
CUX2O14529 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CUX2O14529 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC28.65■■■□□ 2.18
CUX2O14529 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
CUX2O14529 FAM220BP-201ENST00000377689 816 ntBASIC28.65■■■□□ 2.18
CUX2O14529 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC28.65■■■□□ 2.18
CUX2O14529 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
CUX2O14529 TMEM198B-204ENST00000484016 896 ntBASIC28.65■■■□□ 2.18
CUX2O14529 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC28.65■■■□□ 2.18
CUX2O14529 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC28.65■■■□□ 2.18
CUX2O14529 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC28.65■■■□□ 2.18
CUX2O14529 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
CUX2O14529 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC28.65■■■□□ 2.18
CUX2O14529 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CUX2O14529 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CUX2O14529 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC28.64■■■□□ 2.18
CUX2O14529 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CUX2O14529 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC28.64■■■□□ 2.18
CUX2O14529 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC28.64■■■□□ 2.18
CUX2O14529 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.18
CUX2O14529 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.18
CUX2O14529 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
CUX2O14529 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CUX2O14529 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CUX2O14529 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC28.64■■■□□ 2.17
CUX2O14529 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC28.64■■■□□ 2.17
CUX2O14529 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC28.64■■■□□ 2.17
CUX2O14529 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC28.64■■■□□ 2.17
CUX2O14529 MIR8072-201ENST00000614241 80 ntBASIC28.64■■■□□ 2.17
CUX2O14529 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
CUX2O14529 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.17
CUX2O14529 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
CUX2O14529 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC28.63■■■□□ 2.17
CUX2O14529 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC28.63■■■□□ 2.17
CUX2O14529 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
CUX2O14529 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms