Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN4O14493 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN4O14493 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN4O14493 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.05■□□□□ 0.16
CLDN4O14493 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CLDN4O14493 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN4O14493 CRYGEP-201ENST00000412192 528 ntBASIC16.05■□□□□ 0.16
CLDN4O14493 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.05■□□□□ 0.16
CLDN4O14493 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN4O14493 AC108073.2-201ENST00000464002 357 ntBASIC16.05■□□□□ 0.16
CLDN4O14493 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN4O14493 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN4O14493 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN4O14493 MIR4751-201ENST00000578027 74 ntBASIC16.05■□□□□ 0.16
CLDN4O14493 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.05■□□□□ 0.16
CLDN4O14493 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN4O14493 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CLDN4O14493 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN4O14493 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN4O14493 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN4O14493 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN4O14493 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN4O14493 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN4O14493 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.05■□□□□ 0.16
CLDN4O14493 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN4O14493 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN4O14493 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLDN4O14493 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.05■□□□□ 0.16
CLDN4O14493 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN4O14493 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN4O14493 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN4O14493 FRMD8P1-201ENST00000440433 1524 ntBASIC16.04■□□□□ 0.16
CLDN4O14493 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN4O14493 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN4O14493 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN4O14493 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN4O14493 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDN4O14493 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN4O14493 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN4O14493 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.04■□□□□ 0.16
CLDN4O14493 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN4O14493 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.04■□□□□ 0.16
CLDN4O14493 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDN4O14493 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
CLDN4O14493 AC009947.1-201ENST00000444350 727 ntBASIC16.04■□□□□ 0.16
CLDN4O14493 AC087163.2-201ENST00000457299 853 ntBASIC16.04■□□□□ 0.16
CLDN4O14493 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.04■□□□□ 0.16
CLDN4O14493 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CLDN4O14493 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDN4O14493 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.04■□□□□ 0.16
CLDN4O14493 AC010654.1-201ENST00000615722 808 ntBASIC16.04■□□□□ 0.16
CLDN4O14493 AC004790.2-201ENST00000623588 572 ntBASIC16.04■□□□□ 0.16
CLDN4O14493 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
CLDN4O14493 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN4O14493 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CLDN4O14493 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CLDN4O14493 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN4O14493 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN4O14493 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN4O14493 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN4O14493 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN4O14493 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN4O14493 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
CLDN4O14493 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.04■□□□□ 0.16
CLDN4O14493 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN4O14493 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN4O14493 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN4O14493 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN4O14493 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDN4O14493 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CLDN4O14493 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.04■□□□□ 0.16
CLDN4O14493 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN4O14493 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN4O14493 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLDN4O14493 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN4O14493 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN4O14493 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.03■□□□□ 0.16
CLDN4O14493 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN4O14493 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN4O14493 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN4O14493 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN4O14493 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CLDN4O14493 AC129492.6-201ENST00000611383 1305 ntBASIC16.03■□□□□ 0.16
CLDN4O14493 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN4O14493 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CLDN4O14493 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.03■□□□□ 0.16
CLDN4O14493 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN4O14493 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.03■□□□□ 0.16
CLDN4O14493 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN4O14493 AP000347.1-202ENST00000435868 847 ntBASIC16.03■□□□□ 0.16
CLDN4O14493 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN4O14493 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN4O14493 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN4O14493 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CLDN4O14493 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.03■□□□□ 0.16
CLDN4O14493 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN4O14493 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CLDN4O14493 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.03■□□□□ 0.16
CLDN4O14493 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN4O14493 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms