Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SOX1O00570 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.92■□□□□ 0.46
SOX1O00570 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SOX1O00570 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SOX1O00570 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SOX1O00570 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.91■□□□□ 0.46
SOX1O00570 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX1O00570 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX1O00570 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX1O00570 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.91■□□□□ 0.46
SOX1O00570 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.91■□□□□ 0.46
SOX1O00570 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX1O00570 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SOX1O00570 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SOX1O00570 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.91■□□□□ 0.46
SOX1O00570 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX1O00570 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX1O00570 AL353732.1-201ENST00000569618 1459 ntBASIC17.91■□□□□ 0.46
SOX1O00570 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.91■□□□□ 0.46
SOX1O00570 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.91■□□□□ 0.46
SOX1O00570 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SOX1O00570 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SOX1O00570 FO681548.1-201ENST00000455617 1132 ntBASIC17.91■□□□□ 0.46
SOX1O00570 KRT8P13-201ENST00000463294 1010 ntBASIC17.91■□□□□ 0.46
SOX1O00570 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SOX1O00570 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.91■□□□□ 0.46
SOX1O00570 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SOX1O00570 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.91■□□□□ 0.46
SOX1O00570 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.91■□□□□ 0.46
SOX1O00570 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.91■□□□□ 0.46
SOX1O00570 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.91■□□□□ 0.46
SOX1O00570 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.91■□□□□ 0.46
SOX1O00570 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.91■□□□□ 0.46
SOX1O00570 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SOX1O00570 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SOX1O00570 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.91■□□□□ 0.46
SOX1O00570 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.91■□□□□ 0.46
SOX1O00570 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.91■□□□□ 0.46
SOX1O00570 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
SOX1O00570 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SOX1O00570 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SOX1O00570 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
SOX1O00570 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SOX1O00570 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SOX1O00570 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SOX1O00570 AC093484.2-201ENST00000580996 2166 ntBASIC17.9■□□□□ 0.46
SOX1O00570 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.9■□□□□ 0.46
SOX1O00570 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SOX1O00570 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SOX1O00570 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SOX1O00570 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SOX1O00570 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.9■□□□□ 0.46
SOX1O00570 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SOX1O00570 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SOX1O00570 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.9■□□□□ 0.46
SOX1O00570 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SOX1O00570 MEP1AP4-201ENST00000423244 1087 ntBASIC17.9■□□□□ 0.46
SOX1O00570 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.9■□□□□ 0.46
SOX1O00570 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.9■□□□□ 0.46
SOX1O00570 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
SOX1O00570 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.9■□□□□ 0.46
SOX1O00570 MIR5572-201ENST00000583188 137 ntBASIC17.9■□□□□ 0.46
SOX1O00570 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.9■□□□□ 0.46
SOX1O00570 AC004461.2-201ENST00000629517 803 ntBASIC17.9■□□□□ 0.46
SOX1O00570 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SOX1O00570 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.9■□□□□ 0.46
SOX1O00570 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SOX1O00570 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SOX1O00570 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SOX1O00570 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SOX1O00570 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SOX1O00570 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SOX1O00570 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SOX1O00570 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SOX1O00570 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.89■□□□□ 0.46
SOX1O00570 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SOX1O00570 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SOX1O00570 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SOX1O00570 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SOX1O00570 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
SOX1O00570 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SOX1O00570 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SOX1O00570 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SOX1O00570 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SOX1O00570 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SOX1O00570 HINT2P1-201ENST00000419438 481 ntBASIC17.89■□□□□ 0.45
SOX1O00570 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.89■□□□□ 0.45
SOX1O00570 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.89■□□□□ 0.45
SOX1O00570 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.89■□□□□ 0.45
SOX1O00570 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.89■□□□□ 0.45
SOX1O00570 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.89■□□□□ 0.45
SOX1O00570 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.89■□□□□ 0.45
SOX1O00570 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SOX1O00570 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.89■□□□□ 0.45
SOX1O00570 MIR8072-201ENST00000614241 80 ntBASIC17.89■□□□□ 0.45
SOX1O00570 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SOX1O00570 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.89■□□□□ 0.45
SOX1O00570 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.89■□□□□ 0.45
SOX1O00570 CDC14C-201ENST00000428251 1719 ntBASIC17.89■□□□□ 0.45
SOX1O00570 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms