Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM1O00151 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.29■□□□□ 0.2
PDLIM1O00151 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.29■□□□□ 0.2
PDLIM1O00151 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM1O00151 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PDLIM1O00151 SLC25A1P3-201ENST00000395415 828 ntBASIC16.29■□□□□ 0.2
PDLIM1O00151 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM1O00151 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.29■□□□□ 0.2
PDLIM1O00151 AL359075.1-203ENST00000462729 1002 ntBASIC16.29■□□□□ 0.2
PDLIM1O00151 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.29■□□□□ 0.2
PDLIM1O00151 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM1O00151 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
PDLIM1O00151 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.29■□□□□ 0.2
PDLIM1O00151 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM1O00151 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM1O00151 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PDLIM1O00151 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PDLIM1O00151 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PDLIM1O00151 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM1O00151 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
PDLIM1O00151 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PDLIM1O00151 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM1O00151 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
PDLIM1O00151 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PDLIM1O00151 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
PDLIM1O00151 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM1O00151 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM1O00151 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM1O00151 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM1O00151 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PDLIM1O00151 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
PDLIM1O00151 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM1O00151 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.28■□□□□ 0.2
PDLIM1O00151 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.28■□□□□ 0.2
PDLIM1O00151 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PDLIM1O00151 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.28■□□□□ 0.2
PDLIM1O00151 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PDLIM1O00151 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM1O00151 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM1O00151 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM1O00151 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM1O00151 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM1O00151 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PDLIM1O00151 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM1O00151 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM1O00151 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.28■□□□□ 0.2
PDLIM1O00151 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.28■□□□□ 0.2
PDLIM1O00151 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PDLIM1O00151 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.28■□□□□ 0.2
PDLIM1O00151 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.28■□□□□ 0.2
PDLIM1O00151 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM1O00151 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.28■□□□□ 0.2
PDLIM1O00151 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM1O00151 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM1O00151 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM1O00151 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.28■□□□□ 0.2
PDLIM1O00151 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM1O00151 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM1O00151 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM1O00151 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM1O00151 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.28■□□□□ 0.2
PDLIM1O00151 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDLIM1O00151 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.28■□□□□ 0.2
PDLIM1O00151 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.27■□□□□ 0.2
PDLIM1O00151 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.27■□□□□ 0.2
PDLIM1O00151 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.27■□□□□ 0.2
PDLIM1O00151 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM1O00151 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM1O00151 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM1O00151 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM1O00151 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.27■□□□□ 0.2
PDLIM1O00151 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.27■□□□□ 0.2
PDLIM1O00151 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM1O00151 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.27■□□□□ 0.2
PDLIM1O00151 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.27■□□□□ 0.2
PDLIM1O00151 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM1O00151 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM1O00151 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM1O00151 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM1O00151 AL031133.1-201ENST00000406807 723 ntBASIC16.27■□□□□ 0.2
PDLIM1O00151 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM1O00151 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.27■□□□□ 0.2
PDLIM1O00151 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.27■□□□□ 0.2
PDLIM1O00151 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM1O00151 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM1O00151 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.27■□□□□ 0.2
PDLIM1O00151 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM1O00151 AL157888.1-201ENST00000631930 593 ntBASIC16.27■□□□□ 0.2
PDLIM1O00151 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDLIM1O00151 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.27■□□□□ 0.19
PDLIM1O00151 AC093525.9-201ENST00000624961 1746 ntBASIC16.27■□□□□ 0.19
PDLIM1O00151 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PDLIM1O00151 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PDLIM1O00151 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDLIM1O00151 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.27■□□□□ 0.19
PDLIM1O00151 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDLIM1O00151 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.27■□□□□ 0.19
PDLIM1O00151 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDLIM1O00151 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PDLIM1O00151 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms