Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
C4orf47A7E2U8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C4orf47A7E2U8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C4orf47A7E2U8 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.6■□□□□ 0.25
C4orf47A7E2U8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.6■□□□□ 0.25
C4orf47A7E2U8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 AC046185.3-201ENST00000623228 1824 ntBASIC16.59■□□□□ 0.25
C4orf47A7E2U8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 AC093677.2-201ENST00000600169 1863 ntBASIC16.59■□□□□ 0.25
C4orf47A7E2U8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 AL590560.3-201ENST00000623350 461 ntBASIC16.59■□□□□ 0.25
C4orf47A7E2U8 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 PCDHB18P-201ENST00000524813 2368 ntBASIC16.59■□□□□ 0.25
C4orf47A7E2U8 AC100757.3-201ENST00000622361 1406 ntBASIC16.59■□□□□ 0.25
C4orf47A7E2U8 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
C4orf47A7E2U8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
C4orf47A7E2U8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
C4orf47A7E2U8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.58■□□□□ 0.25
C4orf47A7E2U8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.58■□□□□ 0.25
C4orf47A7E2U8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
C4orf47A7E2U8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.58■□□□□ 0.25
C4orf47A7E2U8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.58■□□□□ 0.25
C4orf47A7E2U8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.58■□□□□ 0.25
C4orf47A7E2U8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
C4orf47A7E2U8 FZD10-202ENST00000539839 3282 ntBASIC16.58■□□□□ 0.24
C4orf47A7E2U8 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C4orf47A7E2U8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
C4orf47A7E2U8 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
C4orf47A7E2U8 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.58■□□□□ 0.24
C4orf47A7E2U8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
C4orf47A7E2U8 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.58■□□□□ 0.24
C4orf47A7E2U8 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
C4orf47A7E2U8 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.58■□□□□ 0.24
C4orf47A7E2U8 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
C4orf47A7E2U8 GPR53P-205ENST00000457298 1084 ntBASIC16.58■□□□□ 0.24
C4orf47A7E2U8 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.58■□□□□ 0.24
C4orf47A7E2U8 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.58■□□□□ 0.24
C4orf47A7E2U8 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
C4orf47A7E2U8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
C4orf47A7E2U8 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
C4orf47A7E2U8 AC073592.8-201ENST00000624126 511 ntBASIC16.58■□□□□ 0.24
C4orf47A7E2U8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C4orf47A7E2U8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C4orf47A7E2U8 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.58■□□□□ 0.24
C4orf47A7E2U8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.58■□□□□ 0.24
C4orf47A7E2U8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C4orf47A7E2U8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
C4orf47A7E2U8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
C4orf47A7E2U8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
C4orf47A7E2U8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
C4orf47A7E2U8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
C4orf47A7E2U8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C4orf47A7E2U8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
C4orf47A7E2U8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
C4orf47A7E2U8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
C4orf47A7E2U8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
C4orf47A7E2U8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
C4orf47A7E2U8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms