Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC162PA2VCL2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC162PA2VCL2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC162PA2VCL2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC162PA2VCL2 RNF216P1-203ENST00000404404 2427 ntBASIC17.06■□□□□ 0.32
CCDC162PA2VCL2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CCDC162PA2VCL2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 RPS2P1-201ENST00000434010 821 ntBASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 AL691432.3-201ENST00000621860 400 ntBASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCDC162PA2VCL2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 PCDHB17P-201ENST00000539533 2393 ntBASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 FLJ38576-201ENST00000623820 2459 ntBASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 AL450487.1-201ENST00000426799 995 ntBASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 RNPS1P1-201ENST00000507437 918 ntBASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 RN7SL510P-201ENST00000581311 263 ntBASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 TERC-201ENST00000602385 541 ntBASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 AL121912.1-201ENST00000603683 238 ntBASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 AC107918.4-202ENST00000641623 219 ntBASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC162PA2VCL2 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms