Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 KRT18P1-202ENST00000452408 1331 ntBASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 SPDYE21P-201ENST00000413323 827 ntBASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 AL020989.1-201ENST00000422979 469 ntBASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 MINOS1P3-201ENST00000457048 203 ntBASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 TPSP2-201ENST00000561760 610 ntBASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 AC004817.3-201ENST00000602957 2129 ntBASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 AP000867.4-201ENST00000641616 219 ntBASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 NSUN5P1-202ENST00000421140 1535 ntBASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 NSUN5P2-203ENST00000457352 1529 ntBASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TCRBV9S1A1TA0A576 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 TSSC2-201ENST00000450217 709 ntBASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 KRT17P6-201ENST00000453795 1220 ntBASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 FAM86EP-206ENST00000510506 987 ntBASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TCRBV9S1A1TA0A576 LINC00895-201ENST00000629028 1637 ntBASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TCRBV9S1A1TA0A576 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms