Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC196A0A1B0GTZ2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC196A0A1B0GTZ2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC196A0A1B0GTZ2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC196A0A1B0GTZ2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC196A0A1B0GTZ2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC196A0A1B0GTZ2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CCDC196A0A1B0GTZ2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC196A0A1B0GTZ2 HLA-A-201ENST00000376802 1334 ntBASIC19.8■□□□□ 0.76
CCDC196A0A1B0GTZ2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC196A0A1B0GTZ2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC196A0A1B0GTZ2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC196A0A1B0GTZ2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.8■□□□□ 0.76
CCDC196A0A1B0GTZ2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC196A0A1B0GTZ2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.8■□□□□ 0.76
CCDC196A0A1B0GTZ2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CCDC196A0A1B0GTZ2 AL049840.3-201ENST00000602669 611 ntBASIC19.8■□□□□ 0.76
CCDC196A0A1B0GTZ2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC196A0A1B0GTZ2 AC116407.3-201ENST00000623905 1129 ntBASIC19.8■□□□□ 0.76
CCDC196A0A1B0GTZ2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC196A0A1B0GTZ2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC196A0A1B0GTZ2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC196A0A1B0GTZ2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC196A0A1B0GTZ2 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC196A0A1B0GTZ2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CCDC196A0A1B0GTZ2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CCDC196A0A1B0GTZ2 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC196A0A1B0GTZ2 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC196A0A1B0GTZ2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCDC196A0A1B0GTZ2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CCDC196A0A1B0GTZ2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 AC117500.6-201ENST00000624871 588 ntBASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 AC005915.1-201ENST00000624912 2018 ntBASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 TOP3BP1-201ENST00000420768 1380 ntBASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 AC002310.6-201ENST00000624451 1377 ntBASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC196A0A1B0GTZ2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 AL121894.2-201ENST00000602977 491 ntBASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC196A0A1B0GTZ2 AC129492.6-201ENST00000611383 1305 ntBASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms