Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 LINC00982-205ENST00000420957 435 ntBASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 MIR1199-201ENST00000621445 119 ntBASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCA3PQ9Y6N3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 FER1L4-210ENST00000615531 5998 ntBASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 AC105339.3-201ENST00000560043 636 ntBASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCA3PQ9Y6N3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 AL139424.1-201ENST00000607572 797 ntBASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 AC004706.3-202ENST00000621574 984 ntBASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 CICP6-201ENST00000457191 2729 ntBASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.15■□□□□ 0.18
CLCA3PQ9Y6N3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms