Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.22■□□□□ 0.51
SNX9Q9Y5X1 FAM185BP-201ENST00000443595 716 ntBASIC18.22■□□□□ 0.51
SNX9Q9Y5X1 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.22■□□□□ 0.51
SNX9Q9Y5X1 AC107918.2-201ENST00000530817 355 ntBASIC18.22■□□□□ 0.51
SNX9Q9Y5X1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.22■□□□□ 0.51
SNX9Q9Y5X1 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.22■□□□□ 0.51
SNX9Q9Y5X1 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.22■□□□□ 0.51
SNX9Q9Y5X1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNX9Q9Y5X1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNX9Q9Y5X1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX9Q9Y5X1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
SNX9Q9Y5X1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.22■□□□□ 0.51
SNX9Q9Y5X1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.22■□□□□ 0.51
SNX9Q9Y5X1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
SNX9Q9Y5X1 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SNX9Q9Y5X1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX9Q9Y5X1 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX9Q9Y5X1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNX9Q9Y5X1 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNX9Q9Y5X1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.22■□□□□ 0.51
SNX9Q9Y5X1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SNX9Q9Y5X1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 ACTL9-202ENST00000612068 1252 ntBASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 REXO1L3P-201ENST00000622202 1288 ntBASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 AC004877.2-201ENST00000623941 599 ntBASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 AC092865.6-201ENST00000642101 219 ntBASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNX9Q9Y5X1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
SNX9Q9Y5X1 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 RHOQP3-201ENST00000437982 621 ntBASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 AC023511.2-201ENST00000618803 211 ntBASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 AL513190.1-201ENST00000621254 727 ntBASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 BCAR1-209ENST00000546196 1340 ntBASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNX9Q9Y5X1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SNX9Q9Y5X1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNX9Q9Y5X1 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNX9Q9Y5X1 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNX9Q9Y5X1 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNX9Q9Y5X1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNX9Q9Y5X1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.19■□□□□ 0.5
SNX9Q9Y5X1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SNX9Q9Y5X1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SNX9Q9Y5X1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNX9Q9Y5X1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNX9Q9Y5X1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNX9Q9Y5X1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms