Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 AC007064.4-201ENST00000637740 555 ntBASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSSC4Q9Y5U2 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 AC096734.2-201ENST00000562054 433 ntBASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 AC018845.2-201ENST00000568326 409 ntBASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 AL139327.4-201ENST00000612362 153 ntBASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 AC134684.3-201ENST00000641758 218 ntBASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 AL590787.1-201ENST00000568856 1315 ntBASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 PKD1P5-201ENST00000532415 10291 ntBASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TSSC4Q9Y5U2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TSSC4Q9Y5U2 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TSSC4Q9Y5U2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TSSC4Q9Y5U2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TSSC4Q9Y5U2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TSSC4Q9Y5U2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.37□□□□□ -0.27
TSSC4Q9Y5U2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TSSC4Q9Y5U2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TSSC4Q9Y5U2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.37□□□□□ -0.27
TSSC4Q9Y5U2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TSSC4Q9Y5U2 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TSSC4Q9Y5U2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TSSC4Q9Y5U2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TSSC4Q9Y5U2 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.37□□□□□ -0.27
TSSC4Q9Y5U2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.37□□□□□ -0.27
TSSC4Q9Y5U2 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TSSC4Q9Y5U2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms