Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL4A3BPQ9Y5P4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL4A3BPQ9Y5P4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
COL4A3BPQ9Y5P4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
COL4A3BPQ9Y5P4 AP002414.1-201ENST00000391405 1147 ntBASIC19.07■□□□□ 0.64
COL4A3BPQ9Y5P4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.07■□□□□ 0.64
COL4A3BPQ9Y5P4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.07■□□□□ 0.64
COL4A3BPQ9Y5P4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL4A3BPQ9Y5P4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.07■□□□□ 0.64
COL4A3BPQ9Y5P4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.07■□□□□ 0.64
COL4A3BPQ9Y5P4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.07■□□□□ 0.64
COL4A3BPQ9Y5P4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL4A3BPQ9Y5P4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL4A3BPQ9Y5P4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL4A3BPQ9Y5P4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
COL4A3BPQ9Y5P4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL4A3BPQ9Y5P4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL4A3BPQ9Y5P4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL4A3BPQ9Y5P4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
COL4A3BPQ9Y5P4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.07■□□□□ 0.64
COL4A3BPQ9Y5P4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
COL4A3BPQ9Y5P4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.07■□□□□ 0.64
COL4A3BPQ9Y5P4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.07■□□□□ 0.64
COL4A3BPQ9Y5P4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 RNA5SP416-201ENST00000516838 111 ntBASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 MIR4751-201ENST00000578027 74 ntBASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 AC064836.3-201ENST00000607928 673 ntBASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL4A3BPQ9Y5P4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 AC004790.2-201ENST00000623588 572 ntBASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL4A3BPQ9Y5P4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A3BPQ9Y5P4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A3BPQ9Y5P4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
COL4A3BPQ9Y5P4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A3BPQ9Y5P4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.04■□□□□ 0.64
COL4A3BPQ9Y5P4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A3BPQ9Y5P4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
COL4A3BPQ9Y5P4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A3BPQ9Y5P4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.04■□□□□ 0.64
COL4A3BPQ9Y5P4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL4A3BPQ9Y5P4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms