Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 LINC02012-201ENST00000608206 1725 ntBASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 AC046185.3-201ENST00000623228 1824 ntBASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 AL353593.2-201ENST00000602529 1483 ntBASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 KRT8P10-201ENST00000450021 1447 ntBASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 AC003669.1-201ENST00000334569 611 ntBASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 AL160237.2-201ENST00000556165 472 ntBASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 AP005901.3-202ENST00000581653 237 ntBASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 AC138894.3-201ENST00000603787 634 ntBASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 AC005915.1-201ENST00000624912 2018 ntBASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGB3Q9Y5G1 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB3Q9Y5G1 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGB3Q9Y5G1 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB3Q9Y5G1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB3Q9Y5G1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB3Q9Y5G1 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGB3Q9Y5G1 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB3Q9Y5G1 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB3Q9Y5G1 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB3Q9Y5G1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGB3Q9Y5G1 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGB3Q9Y5G1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB3Q9Y5G1 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB3Q9Y5G1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB3Q9Y5G1 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGB3Q9Y5G1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB3Q9Y5G1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB3Q9Y5G1 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB3Q9Y5G1 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGB3Q9Y5G1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB3Q9Y5G1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB3Q9Y5G1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB3Q9Y5G1 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHGB3Q9Y5G1 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGB3Q9Y5G1 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHGB3Q9Y5G1 EMBP1-201ENST00000458200 901 ntBASIC16.22■□□□□ 0.19
PCDHGB3Q9Y5G1 STK19B-204ENST00000512515 211 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms