Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.13■□□□□ 0.33
PKP3Q9Y446 AC136632.2-201ENST00000512891 861 ntBASIC17.13■□□□□ 0.33
PKP3Q9Y446 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
PKP3Q9Y446 AC105339.3-201ENST00000560043 636 ntBASIC17.13■□□□□ 0.33
PKP3Q9Y446 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PKP3Q9Y446 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PKP3Q9Y446 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.13■□□□□ 0.33
PKP3Q9Y446 AC148477.8-201ENST00000624298 468 ntBASIC17.13■□□□□ 0.33
PKP3Q9Y446 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.13■□□□□ 0.33
PKP3Q9Y446 AC006504.4-201ENST00000592118 1568 ntBASIC17.13■□□□□ 0.33
PKP3Q9Y446 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PKP3Q9Y446 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.13■□□□□ 0.33
PKP3Q9Y446 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PKP3Q9Y446 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.13■□□□□ 0.33
PKP3Q9Y446 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PKP3Q9Y446 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.13■□□□□ 0.33
PKP3Q9Y446 PCDHA12-202ENST00000613593 2588 ntBASIC17.13■□□□□ 0.33
PKP3Q9Y446 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PKP3Q9Y446 NFIC-211ENST00000641145 8399 ntBASIC17.13■□□□□ 0.33
PKP3Q9Y446 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.13■□□□□ 0.33
PKP3Q9Y446 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.13■□□□□ 0.33
PKP3Q9Y446 AC060834.1-201ENST00000443027 2032 ntBASIC17.13■□□□□ 0.33
PKP3Q9Y446 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PKP3Q9Y446 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PKP3Q9Y446 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.12■□□□□ 0.33
PKP3Q9Y446 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PKP3Q9Y446 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PKP3Q9Y446 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PKP3Q9Y446 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PKP3Q9Y446 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.12■□□□□ 0.33
PKP3Q9Y446 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PKP3Q9Y446 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PKP3Q9Y446 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.12■□□□□ 0.33
PKP3Q9Y446 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PKP3Q9Y446 FRMD8P1-201ENST00000440433 1524 ntBASIC17.12■□□□□ 0.33
PKP3Q9Y446 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PKP3Q9Y446 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PKP3Q9Y446 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PKP3Q9Y446 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
PKP3Q9Y446 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.12■□□□□ 0.33
PKP3Q9Y446 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PKP3Q9Y446 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.12■□□□□ 0.33
PKP3Q9Y446 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.12■□□□□ 0.33
PKP3Q9Y446 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PKP3Q9Y446 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PKP3Q9Y446 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PKP3Q9Y446 KRT18P27-201ENST00000427733 1299 ntBASIC17.12■□□□□ 0.33
PKP3Q9Y446 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PKP3Q9Y446 AC093909.1-201ENST00000504731 1122 ntBASIC17.12■□□□□ 0.33
PKP3Q9Y446 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PKP3Q9Y446 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.12■□□□□ 0.33
PKP3Q9Y446 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.12■□□□□ 0.33
PKP3Q9Y446 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
PKP3Q9Y446 FAM215A-202ENST00000632077 792 ntBASIC17.12■□□□□ 0.33
PKP3Q9Y446 PGM5P2-202ENST00000637225 1043 ntBASIC17.12■□□□□ 0.33
PKP3Q9Y446 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.12■□□□□ 0.33
PKP3Q9Y446 AL805961.1-202ENST00000641562 540 ntBASIC17.12■□□□□ 0.33
PKP3Q9Y446 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PKP3Q9Y446 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.12■□□□□ 0.33
PKP3Q9Y446 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.12■□□□□ 0.33
PKP3Q9Y446 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PKP3Q9Y446 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PKP3Q9Y446 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PKP3Q9Y446 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.12■□□□□ 0.33
PKP3Q9Y446 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PKP3Q9Y446 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PKP3Q9Y446 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PKP3Q9Y446 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PKP3Q9Y446 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PKP3Q9Y446 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PKP3Q9Y446 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PKP3Q9Y446 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PKP3Q9Y446 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
PKP3Q9Y446 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PKP3Q9Y446 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PKP3Q9Y446 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PKP3Q9Y446 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
PKP3Q9Y446 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.11■□□□□ 0.33
PKP3Q9Y446 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PKP3Q9Y446 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PKP3Q9Y446 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PKP3Q9Y446 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PKP3Q9Y446 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PKP3Q9Y446 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.11■□□□□ 0.33
PKP3Q9Y446 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.11■□□□□ 0.33
PKP3Q9Y446 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PKP3Q9Y446 AP002414.1-201ENST00000391405 1147 ntBASIC17.11■□□□□ 0.33
PKP3Q9Y446 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PKP3Q9Y446 PTCHD3P3-201ENST00000403073 906 ntBASIC17.11■□□□□ 0.33
PKP3Q9Y446 AL031284.1-201ENST00000419297 478 ntBASIC17.11■□□□□ 0.33
PKP3Q9Y446 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
PKP3Q9Y446 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.11■□□□□ 0.33
PKP3Q9Y446 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.11■□□□□ 0.33
PKP3Q9Y446 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.11■□□□□ 0.33
PKP3Q9Y446 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.11■□□□□ 0.33
PKP3Q9Y446 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PKP3Q9Y446 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.11■□□□□ 0.33
PKP3Q9Y446 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PKP3Q9Y446 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.11■□□□□ 0.33
PKP3Q9Y446 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms