Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 AC107956.1-201ENST00000494359 873 ntBASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RCL1Q9Y2P8 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 AL391256.1-201ENST00000443260 1855 ntBASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 AC096633.1-201ENST00000422446 749 ntBASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 AC012618.2-201ENST00000428058 849 ntBASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 RBM17P1-201ENST00000453646 1190 ntBASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 AC004263.2-201ENST00000617183 678 ntBASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 AL049637.2-201ENST00000641778 930 ntBASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RCL1Q9Y2P8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RCL1Q9Y2P8 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RCL1Q9Y2P8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.97□□□□□ -0.17
RCL1Q9Y2P8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.97□□□□□ -0.17
RCL1Q9Y2P8 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.97□□□□□ -0.17
RCL1Q9Y2P8 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RCL1Q9Y2P8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RCL1Q9Y2P8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.97□□□□□ -0.17
RCL1Q9Y2P8 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RCL1Q9Y2P8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RCL1Q9Y2P8 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RCL1Q9Y2P8 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RCL1Q9Y2P8 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RCL1Q9Y2P8 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RCL1Q9Y2P8 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RCL1Q9Y2P8 UNC93B2-201ENST00000285383 730 ntBASIC13.97□□□□□ -0.17
RCL1Q9Y2P8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RCL1Q9Y2P8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RCL1Q9Y2P8 MYCLP1-201ENST00000372451 1075 ntBASIC13.97□□□□□ -0.17
RCL1Q9Y2P8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.97□□□□□ -0.17
RCL1Q9Y2P8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13.97□□□□□ -0.17
RCL1Q9Y2P8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC13.97□□□□□ -0.17
RCL1Q9Y2P8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms