Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 AC023141.7-201ENST00000430646 407 ntBASIC6.84□□□□□ -1.31
MACF1Q9UPN3 SERBP1P3-201ENST00000459980 809 ntBASIC6.84□□□□□ -1.31
MACF1Q9UPN3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 AC138649.2-201ENST00000615886 705 ntBASIC6.84□□□□□ -1.31
MACF1Q9UPN3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC6.84□□□□□ -1.31
MACF1Q9UPN3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC6.84□□□□□ -1.32
MACF1Q9UPN3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.32
MACF1Q9UPN3 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC6.84□□□□□ -1.32
MACF1Q9UPN3 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
MACF1Q9UPN3 IGKV1OR-2-201ENST00000457995 350 ntBASIC6.84□□□□□ -1.32
MACF1Q9UPN3 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC6.84□□□□□ -1.32
MACF1Q9UPN3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC6.84□□□□□ -1.32
MACF1Q9UPN3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
MACF1Q9UPN3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.32
MACF1Q9UPN3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
MACF1Q9UPN3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC6.84□□□□□ -1.32
MACF1Q9UPN3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 AL589987.1-201ENST00000453380 819 ntBASIC6.83□□□□□ -1.32
MACF1Q9UPN3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 AC244250.3-201ENST00000620749 366 ntBASIC6.83□□□□□ -1.32
MACF1Q9UPN3 AC138951.2-201ENST00000623455 1161 ntBASIC6.83□□□□□ -1.32
MACF1Q9UPN3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 AC018735.1-201ENST00000437208 1502 ntBASIC6.83□□□□□ -1.32
MACF1Q9UPN3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC6.83□□□□□ -1.32
MACF1Q9UPN3 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 NEU3-205ENST00000531619 582 ntTSL 5 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 AC092337.1-201ENST00000568699 1129 ntBASIC6.83□□□□□ -1.32
MACF1Q9UPN3 AC105021.1-202ENST00000570572 669 ntBASIC6.83□□□□□ -1.32
MACF1Q9UPN3 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 PRKN-211ENST00000615065 261 ntTSL 5 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 EP400NL-214ENST00000641289 2402 ntBASIC6.83□□□□□ -1.32
MACF1Q9UPN3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 HLA-DPA2-205ENST00000433582 733 ntBASIC6.83□□□□□ -1.32
MACF1Q9UPN3 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 AC016700.1-201ENST00000429424 312 ntBASIC6.83□□□□□ -1.32
MACF1Q9UPN3 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 IMPDH1P4-201ENST00000445028 1534 ntBASIC6.83□□□□□ -1.32
MACF1Q9UPN3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
MACF1Q9UPN3 MSTO2P-201ENST00000314835 1709 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms