Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NCDNQ9UBB6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCDNQ9UBB6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCDNQ9UBB6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCDNQ9UBB6 AC093677.2-201ENST00000600169 1863 ntBASIC16.86■□□□□ 0.29
NCDNQ9UBB6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
NCDNQ9UBB6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCDNQ9UBB6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCDNQ9UBB6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NCDNQ9UBB6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCDNQ9UBB6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCDNQ9UBB6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCDNQ9UBB6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NCDNQ9UBB6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCDNQ9UBB6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NCDNQ9UBB6 AC098614.1-201ENST00000368528 745 ntBASIC16.86■□□□□ 0.29
NCDNQ9UBB6 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.86■□□□□ 0.29
NCDNQ9UBB6 MIR1909-201ENST00000411312 80 ntBASIC16.86■□□□□ 0.29
NCDNQ9UBB6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.86■□□□□ 0.29
NCDNQ9UBB6 SLC25A6P5-201ENST00000435663 894 ntBASIC16.86■□□□□ 0.29
NCDNQ9UBB6 SPTLC1P1-201ENST00000447199 261 ntBASIC16.86■□□□□ 0.29
NCDNQ9UBB6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCDNQ9UBB6 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.86■□□□□ 0.29
NCDNQ9UBB6 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
NCDNQ9UBB6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.86■□□□□ 0.29
NCDNQ9UBB6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCDNQ9UBB6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.86■□□□□ 0.29
NCDNQ9UBB6 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.86■□□□□ 0.29
NCDNQ9UBB6 TP53TG3HP-202ENST00000569755 579 ntBASIC16.86■□□□□ 0.29
NCDNQ9UBB6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.86■□□□□ 0.29
NCDNQ9UBB6 MIR4515-201ENST00000584082 81 ntBASIC16.86■□□□□ 0.29
NCDNQ9UBB6 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.86■□□□□ 0.29
NCDNQ9UBB6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCDNQ9UBB6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
NCDNQ9UBB6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCDNQ9UBB6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.86■□□□□ 0.29
NCDNQ9UBB6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 AC002558.1-201ENST00000488906 803 ntBASIC16.85■□□□□ 0.29
NCDNQ9UBB6 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 AL132655.2-201ENST00000596276 594 ntBASIC16.85■□□□□ 0.29
NCDNQ9UBB6 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.85■□□□□ 0.29
NCDNQ9UBB6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 AC084121.4-201ENST00000641598 221 ntBASIC16.85■□□□□ 0.29
NCDNQ9UBB6 AF228730.8-201ENST00000642140 221 ntBASIC16.85■□□□□ 0.29
NCDNQ9UBB6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.85■□□□□ 0.29
NCDNQ9UBB6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 AC140912.1-201ENST00000577171 1054 ntBASIC16.84■□□□□ 0.29
NCDNQ9UBB6 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.84■□□□□ 0.29
NCDNQ9UBB6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 359.9 ms