Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCM2LQ9NUG4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 AC092364.2-201ENST00000596710 2692 ntBASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 AL365203.3-201ENST00000609742 2057 ntBASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.27■□□□□ 0.2
CCM2LQ9NUG4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCM2LQ9NUG4 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.27■□□□□ 0.19
CCM2LQ9NUG4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.27■□□□□ 0.19
CCM2LQ9NUG4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCM2LQ9NUG4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCM2LQ9NUG4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCM2LQ9NUG4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCM2LQ9NUG4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
CCM2LQ9NUG4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.27■□□□□ 0.19
CCM2LQ9NUG4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.27■□□□□ 0.19
CCM2LQ9NUG4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCM2LQ9NUG4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.27■□□□□ 0.19
CCM2LQ9NUG4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.27■□□□□ 0.19
CCM2LQ9NUG4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CCM2LQ9NUG4 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.27■□□□□ 0.19
CCM2LQ9NUG4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 HBZP1-201ENST00000354915 429 ntBASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 AL022342.1-201ENST00000400363 863 ntBASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 BX276092.5-203ENST00000456199 560 ntBASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 AC004263.2-201ENST00000617183 678 ntBASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCM2LQ9NUG4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms