Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AL139327.4-201ENST00000612362 153 ntBASIC14.75□□□□□ -0.05
CHMP1AQ9HD42 AC011558.1-201ENST00000623459 338 ntBASIC14.75□□□□□ -0.05
CHMP1AQ9HD42 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP1AQ9HD42 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP1AQ9HD42 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CHMP1AQ9HD42 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CHMP1AQ9HD42 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
CHMP1AQ9HD42 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.75□□□□□ -0.05
CHMP1AQ9HD42 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP1AQ9HD42 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP1AQ9HD42 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP1AQ9HD42 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP1AQ9HD42 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CHMP1AQ9HD42 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP1AQ9HD42 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.75□□□□□ -0.05
CHMP1AQ9HD42 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP1AQ9HD42 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 AC092597.1-201ENST00000487352 616 ntBASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 AC139887.4-201ENST00000607877 719 ntBASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 AC005363.2-201ENST00000618631 242 ntBASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP1AQ9HD42 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.73□□□□□ -0.05
CHMP1AQ9HD42 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1AQ9HD42 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.73□□□□□ -0.05
CHMP1AQ9HD42 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CHMP1AQ9HD42 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.73□□□□□ -0.05
CHMP1AQ9HD42 AC060834.1-201ENST00000443027 2032 ntBASIC14.73□□□□□ -0.05
CHMP1AQ9HD42 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1AQ9HD42 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1AQ9HD42 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1AQ9HD42 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.73□□□□□ -0.05
CHMP1AQ9HD42 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CHMP1AQ9HD42 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.73□□□□□ -0.05
CHMP1AQ9HD42 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.73□□□□□ -0.05
CHMP1AQ9HD42 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.73□□□□□ -0.05
CHMP1AQ9HD42 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1AQ9HD42 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1AQ9HD42 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1AQ9HD42 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1AQ9HD42 PCDHB17P-201ENST00000539533 2393 ntBASIC14.73□□□□□ -0.05
CHMP1AQ9HD42 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.73□□□□□ -0.05
CHMP1AQ9HD42 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP1AQ9HD42 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms