Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
EFCC1Q9HA90 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.83■□□□□ 0.76
EFCC1Q9HA90 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
EFCC1Q9HA90 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
EFCC1Q9HA90 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
EFCC1Q9HA90 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
EFCC1Q9HA90 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
EFCC1Q9HA90 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 AC009113.1-201ENST00000570267 2443 ntBASIC19.82■□□□□ 0.76
EFCC1Q9HA90 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 TREML5P-201ENST00000421694 576 ntBASIC19.82■□□□□ 0.76
EFCC1Q9HA90 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 AC079140.1-201ENST00000508039 487 ntBASIC19.82■□□□□ 0.76
EFCC1Q9HA90 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 AC140878.1-201ENST00000565277 250 ntBASIC19.82■□□□□ 0.76
EFCC1Q9HA90 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 ACTL9-202ENST00000612068 1252 ntBASIC19.82■□□□□ 0.76
EFCC1Q9HA90 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.82■□□□□ 0.76
EFCC1Q9HA90 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.82■□□□□ 0.76
EFCC1Q9HA90 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 AC099522.2-201ENST00000607001 744 ntBASIC19.81■□□□□ 0.76
EFCC1Q9HA90 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.81■□□□□ 0.76
EFCC1Q9HA90 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EFCC1Q9HA90 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
EFCC1Q9HA90 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
EFCC1Q9HA90 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
EFCC1Q9HA90 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.8■□□□□ 0.76
EFCC1Q9HA90 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EFCC1Q9HA90 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EFCC1Q9HA90 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EFCC1Q9HA90 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.8■□□□□ 0.76
EFCC1Q9HA90 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
EFCC1Q9HA90 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
EFCC1Q9HA90 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.8■□□□□ 0.76
EFCC1Q9HA90 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
EFCC1Q9HA90 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.8■□□□□ 0.76
EFCC1Q9HA90 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.8■□□□□ 0.76
EFCC1Q9HA90 RN7SL589P-201ENST00000481268 310 ntBASIC19.8■□□□□ 0.76
EFCC1Q9HA90 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
EFCC1Q9HA90 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.8■□□□□ 0.76
EFCC1Q9HA90 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.8■□□□□ 0.76
EFCC1Q9HA90 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
EFCC1Q9HA90 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EFCC1Q9HA90 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EFCC1Q9HA90 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms