Protein–RNA interactions for Protein: Q9C0C6

CIPC, CLOCK-interacting pacemaker, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIPCQ9C0C6 ELL2P1-201ENST00000413990 1906 ntBASIC17.42■□□□□ 0.38
CIPCQ9C0C6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CIPCQ9C0C6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CIPCQ9C0C6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CIPCQ9C0C6 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CIPCQ9C0C6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.42■□□□□ 0.38
CIPCQ9C0C6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CIPCQ9C0C6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.42■□□□□ 0.38
CIPCQ9C0C6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
CIPCQ9C0C6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CIPCQ9C0C6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 AL138688.1-201ENST00000624851 1594 ntBASIC17.41■□□□□ 0.38
CIPCQ9C0C6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 AC091812.2-201ENST00000619081 385 ntBASIC17.41■□□□□ 0.38
CIPCQ9C0C6 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.41■□□□□ 0.38
CIPCQ9C0C6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIPCQ9C0C6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 AC141586.5-201ENST00000624546 2050 ntBASIC17.4■□□□□ 0.38
CIPCQ9C0C6 AC139713.2-201ENST00000641328 2723 ntBASIC17.4■□□□□ 0.38
CIPCQ9C0C6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 AC068137.2-201ENST00000605408 478 ntBASIC17.4■□□□□ 0.38
CIPCQ9C0C6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CIPCQ9C0C6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CIPCQ9C0C6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
CIPCQ9C0C6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CIPCQ9C0C6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.39■□□□□ 0.37
CIPCQ9C0C6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CIPCQ9C0C6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.39■□□□□ 0.37
CIPCQ9C0C6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CIPCQ9C0C6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms