Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
VRK1Q99986 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VRK1Q99986 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK1Q99986 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
VRK1Q99986 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK1Q99986 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.14■□□□□ 0.01
VRK1Q99986 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.14■□□□□ 0.01
VRK1Q99986 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
VRK1Q99986 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
VRK1Q99986 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
VRK1Q99986 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK1Q99986 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK1Q99986 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
VRK1Q99986 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK1Q99986 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
VRK1Q99986 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
VRK1Q99986 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
VRK1Q99986 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VRK1Q99986 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VRK1Q99986 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.13■□□□□ 0.01
VRK1Q99986 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VRK1Q99986 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
VRK1Q99986 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VRK1Q99986 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VRK1Q99986 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
VRK1Q99986 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
VRK1Q99986 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
VRK1Q99986 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VRK1Q99986 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
VRK1Q99986 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.13■□□□□ 0.01
VRK1Q99986 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VRK1Q99986 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VRK1Q99986 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VRK1Q99986 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VRK1Q99986 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.13■□□□□ 0.01
VRK1Q99986 RNPS1P1-201ENST00000507437 918 ntBASIC15.13■□□□□ 0.01
VRK1Q99986 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.13■□□□□ 0.01
VRK1Q99986 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.13■□□□□ 0.01
VRK1Q99986 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
VRK1Q99986 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.13■□□□□ 0.01
VRK1Q99986 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.13■□□□□ 0.01
VRK1Q99986 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
VRK1Q99986 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.13■□□□□ 0.01
VRK1Q99986 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VRK1Q99986 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
VRK1Q99986 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VRK1Q99986 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.13■□□□□ 0.01
VRK1Q99986 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VRK1Q99986 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
VRK1Q99986 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VRK1Q99986 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VRK1Q99986 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
VRK1Q99986 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VRK1Q99986 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.13■□□□□ 0.01
VRK1Q99986 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VRK1Q99986 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.13■□□□□ 0.01
VRK1Q99986 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
VRK1Q99986 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
VRK1Q99986 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VRK1Q99986 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VRK1Q99986 KRT18P55-202ENST00000578578 1546 ntBASIC15.12■□□□□ 0.01
VRK1Q99986 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
VRK1Q99986 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.12■□□□□ 0.01
VRK1Q99986 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.12■□□□□ 0.01
VRK1Q99986 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VRK1Q99986 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.12■□□□□ 0.01
VRK1Q99986 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VRK1Q99986 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VRK1Q99986 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
VRK1Q99986 AP005117.1-201ENST00000584346 1413 ntBASIC15.12■□□□□ 0.01
VRK1Q99986 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.12■□□□□ 0.01
VRK1Q99986 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VRK1Q99986 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VRK1Q99986 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VRK1Q99986 AL031284.1-201ENST00000419297 478 ntBASIC15.12■□□□□ 0.01
VRK1Q99986 AC007967.3-201ENST00000434308 558 ntBASIC15.12■□□□□ 0.01
VRK1Q99986 AP000347.1-202ENST00000435868 847 ntBASIC15.12■□□□□ 0.01
VRK1Q99986 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.12■□□□□ 0.01
VRK1Q99986 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.12■□□□□ 0.01
VRK1Q99986 FGFR3P6-201ENST00000457012 610 ntBASIC15.12■□□□□ 0.01
VRK1Q99986 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.12■□□□□ 0.01
VRK1Q99986 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.12■□□□□ 0.01
VRK1Q99986 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VRK1Q99986 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VRK1Q99986 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VRK1Q99986 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.12■□□□□ 0.01
VRK1Q99986 AL596257.1-201ENST00000641463 2694 ntBASIC15.12■□□□□ 0.01
VRK1Q99986 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VRK1Q99986 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.12■□□□□ 0.01
VRK1Q99986 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VRK1Q99986 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VRK1Q99986 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VRK1Q99986 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.12■□□□□ 0.01
VRK1Q99986 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.12■□□□□ 0.01
VRK1Q99986 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VRK1Q99986 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VRK1Q99986 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VRK1Q99986 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VRK1Q99986 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
VRK1Q99986 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms