Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDCA3Q99618 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.56■□□□□ 0.4
CDCA3Q99618 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.56■□□□□ 0.4
CDCA3Q99618 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.56■□□□□ 0.4
CDCA3Q99618 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.56■□□□□ 0.4
CDCA3Q99618 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.56■□□□□ 0.4
CDCA3Q99618 API5-211ENST00000534695 560 ntTSL 5 BASIC17.56■□□□□ 0.4
CDCA3Q99618 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.56■□□□□ 0.4
CDCA3Q99618 AL589739.1-201ENST00000607720 493 ntBASIC17.56■□□□□ 0.4
CDCA3Q99618 AC008738.7-201ENST00000609744 511 ntBASIC17.56■□□□□ 0.4
CDCA3Q99618 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDCA3Q99618 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CDCA3Q99618 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CDCA3Q99618 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.56■□□□□ 0.4
CDCA3Q99618 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDCA3Q99618 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
CDCA3Q99618 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
CDCA3Q99618 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CDCA3Q99618 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CDCA3Q99618 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CDCA3Q99618 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CDCA3Q99618 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CDCA3Q99618 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDCA3Q99618 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CDCA3Q99618 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.56■□□□□ 0.4
CDCA3Q99618 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDCA3Q99618 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA3Q99618 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CDCA3Q99618 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.55■□□□□ 0.4
CDCA3Q99618 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA3Q99618 AL391825.1-201ENST00000457671 1364 ntBASIC17.55■□□□□ 0.4
CDCA3Q99618 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA3Q99618 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CDCA3Q99618 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.55■□□□□ 0.4
CDCA3Q99618 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA3Q99618 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA3Q99618 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CDCA3Q99618 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.55■□□□□ 0.4
CDCA3Q99618 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA3Q99618 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.55■□□□□ 0.4
CDCA3Q99618 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA3Q99618 SLC25A6P5-201ENST00000435663 894 ntBASIC17.55■□□□□ 0.4
CDCA3Q99618 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.55■□□□□ 0.4
CDCA3Q99618 IGHV3-71-201ENST00000523324 359 ntBASIC17.55■□□□□ 0.4
CDCA3Q99618 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA3Q99618 MIR4492-201ENST00000581627 80 ntBASIC17.55■□□□□ 0.4
CDCA3Q99618 AL844908.2-201ENST00000609461 460 ntBASIC17.55■□□□□ 0.4
CDCA3Q99618 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA3Q99618 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA3Q99618 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CDCA3Q99618 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.55■□□□□ 0.4
CDCA3Q99618 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDCA3Q99618 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.55■□□□□ 0.4
CDCA3Q99618 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA3Q99618 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA3Q99618 BTBD7P1-201ENST00000447253 1453 ntBASIC17.55■□□□□ 0.4
CDCA3Q99618 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.55■□□□□ 0.4
CDCA3Q99618 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.55■□□□□ 0.4
CDCA3Q99618 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA3Q99618 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA3Q99618 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CDCA3Q99618 AC016396.2-201ENST00000562575 1417 ntBASIC17.55■□□□□ 0.4
CDCA3Q99618 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDCA3Q99618 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.55■□□□□ 0.4
CDCA3Q99618 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA3Q99618 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.54■□□□□ 0.4
CDCA3Q99618 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.54■□□□□ 0.4
CDCA3Q99618 LINC00896-202ENST00000609602 2128 ntBASIC17.54■□□□□ 0.4
CDCA3Q99618 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.54■□□□□ 0.4
CDCA3Q99618 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA3Q99618 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA3Q99618 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA3Q99618 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA3Q99618 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA3Q99618 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.54■□□□□ 0.4
CDCA3Q99618 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CDCA3Q99618 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA3Q99618 AC087499.6-201ENST00000411576 835 ntBASIC17.54■□□□□ 0.4
CDCA3Q99618 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.54■□□□□ 0.4
CDCA3Q99618 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA3Q99618 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.54■□□□□ 0.4
CDCA3Q99618 ZNF890P-202ENST00000530367 1156 ntBASIC17.54■□□□□ 0.4
CDCA3Q99618 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA3Q99618 RN7SL828P-201ENST00000607615 303 ntBASIC17.54■□□□□ 0.4
CDCA3Q99618 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.54■□□□□ 0.4
CDCA3Q99618 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.54■□□□□ 0.4
CDCA3Q99618 ABALON-201ENST00000629058 1903 ntBASIC17.54■□□□□ 0.4
CDCA3Q99618 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA3Q99618 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.54■□□□□ 0.4
CDCA3Q99618 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA3Q99618 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDCA3Q99618 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.54■□□□□ 0.4
CDCA3Q99618 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.54■□□□□ 0.4
CDCA3Q99618 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.53■□□□□ 0.4
CDCA3Q99618 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA3Q99618 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.53■□□□□ 0.4
CDCA3Q99618 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CDCA3Q99618 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CDCA3Q99618 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CDCA3Q99618 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms