Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 AC132938.6-201ENST00000623828 1655 ntBASIC12.97□□□□□ -0.33
AP1S3Q96PC3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 AP005242.2-201ENST00000580065 1175 ntBASIC12.97□□□□□ -0.33
AP1S3Q96PC3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 AC010240.3-201ENST00000607688 395 ntBASIC12.97□□□□□ -0.33
AP1S3Q96PC3 LINC01451-201ENST00000623792 534 ntBASIC12.97□□□□□ -0.33
AP1S3Q96PC3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 ID1-201ENST00000376105 1233 ntBASIC12.96□□□□□ -0.33
AP1S3Q96PC3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 CCR12P-201ENST00000446203 998 ntBASIC12.96□□□□□ -0.33
AP1S3Q96PC3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 AP003041.3-201ENST00000527151 707 ntBASIC12.96□□□□□ -0.33
AP1S3Q96PC3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 AP001412.1-201ENST00000608405 714 ntBASIC12.96□□□□□ -0.33
AP1S3Q96PC3 AC092666.2-201ENST00000613287 246 ntBASIC12.96□□□□□ -0.33
AP1S3Q96PC3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC12.96□□□□□ -0.33
AP1S3Q96PC3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
AP1S3Q96PC3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
AP1S3Q96PC3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.96□□□□□ -0.34
AP1S3Q96PC3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
AP1S3Q96PC3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
AP1S3Q96PC3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
AP1S3Q96PC3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
AP1S3Q96PC3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
AP1S3Q96PC3 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
AP1S3Q96PC3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
AP1S3Q96PC3 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
AP1S3Q96PC3 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
AP1S3Q96PC3 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.96□□□□□ -0.34
AP1S3Q96PC3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC12.96□□□□□ -0.34
AP1S3Q96PC3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
AP1S3Q96PC3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.34
AP1S3Q96PC3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC12.95□□□□□ -0.34
AP1S3Q96PC3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms