Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 AL138688.1-201ENST00000624851 1594 ntBASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 AC055876.3-201ENST00000431496 288 ntBASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 AL592309.1-201ENST00000443127 649 ntBASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 SLC25A6P2-201ENST00000497974 877 ntBASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 AL512356.2-201ENST00000546955 174 ntBASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 AC138649.4-201ENST00000612222 287 ntBASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 AF228730.6-201ENST00000641497 218 ntBASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 AC084121.3-201ENST00000641716 218 ntBASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 AL645728.2-201ENST00000641974 660 ntBASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 AC105233.6-201ENST00000642093 218 ntBASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC46A1Q96NT5 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.27■□□□□ 0.19
SLC46A1Q96NT5 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.27■□□□□ 0.19
SLC46A1Q96NT5 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC46A1Q96NT5 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SLC46A1Q96NT5 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC46A1Q96NT5 AL135999.2-201ENST00000622438 1686 ntBASIC16.27■□□□□ 0.19
SLC46A1Q96NT5 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.27■□□□□ 0.19
SLC46A1Q96NT5 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.27■□□□□ 0.19
SLC46A1Q96NT5 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC46A1Q96NT5 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 BASP1P1-201ENST00000430708 665 ntBASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 AC087163.2-201ENST00000457299 853 ntBASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 RN7SL589P-201ENST00000481268 310 ntBASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 AC051619.7-201ENST00000568314 623 ntBASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 LINC00896-202ENST00000609602 2128 ntBASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC46A1Q96NT5 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLC46A1Q96NT5 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms