Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNX27Q96L92 AC005332.8-201ENST00000622750 2735 ntBASIC18.33■□□□□ 0.53
SNX27Q96L92 AC139713.2-201ENST00000641328 2723 ntBASIC18.33■□□□□ 0.53
SNX27Q96L92 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SNX27Q96L92 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SNX27Q96L92 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SNX27Q96L92 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SNX27Q96L92 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNX27Q96L92 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.33■□□□□ 0.52
SNX27Q96L92 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.33■□□□□ 0.52
SNX27Q96L92 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNX27Q96L92 AP002472.1-201ENST00000577490 586 ntBASIC18.33■□□□□ 0.52
SNX27Q96L92 MIR4469-201ENST00000583919 79 ntBASIC18.33■□□□□ 0.52
SNX27Q96L92 MIR4515-201ENST00000584082 81 ntBASIC18.33■□□□□ 0.52
SNX27Q96L92 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.33■□□□□ 0.52
SNX27Q96L92 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.33■□□□□ 0.52
SNX27Q96L92 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.33■□□□□ 0.52
SNX27Q96L92 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX27Q96L92 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNX27Q96L92 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNX27Q96L92 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX27Q96L92 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.33■□□□□ 0.52
SNX27Q96L92 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.33■□□□□ 0.52
SNX27Q96L92 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX27Q96L92 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.33■□□□□ 0.52
SNX27Q96L92 AL353732.1-201ENST00000569618 1459 ntBASIC18.33■□□□□ 0.52
SNX27Q96L92 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNX27Q96L92 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SNX27Q96L92 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SNX27Q96L92 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX27Q96L92 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX27Q96L92 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX27Q96L92 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SNX27Q96L92 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX27Q96L92 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX27Q96L92 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX27Q96L92 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX27Q96L92 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
SNX27Q96L92 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX27Q96L92 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.32■□□□□ 0.52
SNX27Q96L92 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX27Q96L92 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.32■□□□□ 0.52
SNX27Q96L92 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.32■□□□□ 0.52
SNX27Q96L92 AL031432.2-201ENST00000566714 459 ntBASIC18.32■□□□□ 0.52
SNX27Q96L92 AL928711.1-201ENST00000570165 459 ntBASIC18.32■□□□□ 0.52
SNX27Q96L92 AC091167.2-201ENST00000579581 588 ntBASIC18.32■□□□□ 0.52
SNX27Q96L92 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SNX27Q96L92 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX27Q96L92 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SNX27Q96L92 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNX27Q96L92 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNX27Q96L92 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX27Q96L92 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX27Q96L92 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX27Q96L92 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX27Q96L92 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.32■□□□□ 0.52
SNX27Q96L92 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX27Q96L92 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX27Q96L92 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX27Q96L92 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNX27Q96L92 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SNX27Q96L92 SLC22A20-204ENST00000530038 1673 ntBASIC18.31■□□□□ 0.52
SNX27Q96L92 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX27Q96L92 ELL2P1-201ENST00000413990 1906 ntBASIC18.31■□□□□ 0.52
SNX27Q96L92 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SNX27Q96L92 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX27Q96L92 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.31■□□□□ 0.52
SNX27Q96L92 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SNX27Q96L92 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SNX27Q96L92 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.31■□□□□ 0.52
SNX27Q96L92 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SNX27Q96L92 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.31■□□□□ 0.52
SNX27Q96L92 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SNX27Q96L92 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX27Q96L92 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX27Q96L92 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX27Q96L92 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX27Q96L92 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.31■□□□□ 0.52
SNX27Q96L92 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX27Q96L92 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNX27Q96L92 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.31■□□□□ 0.52
SNX27Q96L92 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.31■□□□□ 0.52
SNX27Q96L92 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX27Q96L92 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.31■□□□□ 0.52
SNX27Q96L92 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.31■□□□□ 0.52
SNX27Q96L92 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.31■□□□□ 0.52
SNX27Q96L92 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX27Q96L92 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNX27Q96L92 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNX27Q96L92 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SNX27Q96L92 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX27Q96L92 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX27Q96L92 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNX27Q96L92 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX27Q96L92 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.31■□□□□ 0.52
SNX27Q96L92 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX27Q96L92 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SNX27Q96L92 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX27Q96L92 KRT8P49-201ENST00000604166 1432 ntBASIC18.31■□□□□ 0.52
SNX27Q96L92 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms