Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.26■□□□□ 0.67
CDK5RAP3Q96JB5 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP3Q96JB5 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP3Q96JB5 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CDK5RAP3Q96JB5 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP3Q96JB5 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP3Q96JB5 FAM197Y8-203ENST00000450145 560 ntBASIC19.26■□□□□ 0.67
CDK5RAP3Q96JB5 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.26■□□□□ 0.67
CDK5RAP3Q96JB5 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CDK5RAP3Q96JB5 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.26■□□□□ 0.67
CDK5RAP3Q96JB5 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.26■□□□□ 0.67
CDK5RAP3Q96JB5 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP3Q96JB5 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CDK5RAP3Q96JB5 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP3Q96JB5 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP3Q96JB5 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CDK5RAP3Q96JB5 AD000864.1-201ENST00000624076 2295 ntBASIC19.26■□□□□ 0.67
CDK5RAP3Q96JB5 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP3Q96JB5 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP3Q96JB5 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP3Q96JB5 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK5RAP3Q96JB5 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 AC022211.2-201ENST00000585075 2527 ntBASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 LAGE3P1-201ENST00000425356 484 ntBASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 FAAHP1-202ENST00000446499 1238 ntBASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 AF186996.4-201ENST00000467186 377 ntBASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 TP73-AS1-207ENST00000624167 988 ntBASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 FRMD8P1-201ENST00000440433 1524 ntBASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 AL590787.1-201ENST00000568856 1315 ntBASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 PRORSD1P-202ENST00000563365 2154 ntBASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CDK5RAP3Q96JB5 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 AC092068.3-201ENST00000587894 2016 ntBASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 RNPS1P1-201ENST00000507437 918 ntBASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 OR7E14P-202ENST00000530490 1290 ntBASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 AC006557.2-201ENST00000592985 1240 ntBASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 AC107918.4-202ENST00000641623 219 ntBASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDK5RAP3Q96JB5 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms