Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE2Q96FN4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE2Q96FN4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.89□□□□□ -0.03
CPNE2Q96FN4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.89□□□□□ -0.03
CPNE2Q96FN4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE2Q96FN4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE2Q96FN4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE2Q96FN4 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE2Q96FN4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE2Q96FN4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE2Q96FN4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE2Q96FN4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE2Q96FN4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE2Q96FN4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CPNE2Q96FN4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 AC003669.1-201ENST00000334569 611 ntBASIC14.88□□□□□ -0.03
CPNE2Q96FN4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 AL138831.2-201ENST00000606564 490 ntBASIC14.88□□□□□ -0.03
CPNE2Q96FN4 AL353801.3-201ENST00000609898 542 ntBASIC14.88□□□□□ -0.03
CPNE2Q96FN4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.88□□□□□ -0.03
CPNE2Q96FN4 AC006011.2-201ENST00000621313 1158 ntBASIC14.88□□□□□ -0.03
CPNE2Q96FN4 AC124864.1-201ENST00000623408 392 ntBASIC14.88□□□□□ -0.03
CPNE2Q96FN4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 EGFEM1P-202ENST00000431685 1563 ntBASIC14.88□□□□□ -0.03
CPNE2Q96FN4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPNE2Q96FN4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.87□□□□□ -0.03
CPNE2Q96FN4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 AC022616.7-201ENST00000525383 220 ntBASIC14.87□□□□□ -0.03
CPNE2Q96FN4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 STK25P1-201ENST00000585406 838 ntBASIC14.87□□□□□ -0.03
CPNE2Q96FN4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.87□□□□□ -0.03
CPNE2Q96FN4 AC083849.1-201ENST00000615227 514 ntBASIC14.87□□□□□ -0.03
CPNE2Q96FN4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms