Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 AL845331.1-201ENST00000424978 1190 ntBASIC16.43■□□□□ 0.22
VPS33AQ96AX1 AC103564.2-201ENST00000432853 1299 ntBASIC16.43■□□□□ 0.22
VPS33AQ96AX1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 AC092647.4-201ENST00000457211 535 ntBASIC16.43■□□□□ 0.22
VPS33AQ96AX1 RN7SL606P-201ENST00000472779 293 ntBASIC16.43■□□□□ 0.22
VPS33AQ96AX1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 AC083849.1-201ENST00000615227 514 ntBASIC16.43■□□□□ 0.22
VPS33AQ96AX1 AC124864.1-201ENST00000623408 392 ntBASIC16.43■□□□□ 0.22
VPS33AQ96AX1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.43■□□□□ 0.22
VPS33AQ96AX1 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
VPS33AQ96AX1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 PCDHA1-201ENST00000378133 2726 ntBASIC16.42■□□□□ 0.22
VPS33AQ96AX1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 AL592071.1-201ENST00000611956 408 ntBASIC16.42■□□□□ 0.22
VPS33AQ96AX1 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
VPS33AQ96AX1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.41■□□□□ 0.22
VPS33AQ96AX1 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 FAM220CP-201ENST00000395253 831 ntBASIC16.41■□□□□ 0.22
VPS33AQ96AX1 TSPY22P-201ENST00000427496 604 ntBASIC16.41■□□□□ 0.22
VPS33AQ96AX1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.41■□□□□ 0.22
VPS33AQ96AX1 AL353801.3-201ENST00000609898 542 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms