Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TM9SF4Q92544 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.15■□□□□ 0.18
TM9SF4Q92544 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
TM9SF4Q92544 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TM9SF4Q92544 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
TM9SF4Q92544 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.14■□□□□ 0.18
TM9SF4Q92544 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.14■□□□□ 0.18
TM9SF4Q92544 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
TM9SF4Q92544 AL118508.1-201ENST00000613502 2345 ntBASIC16.14■□□□□ 0.18
TM9SF4Q92544 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.14■□□□□ 0.18
TM9SF4Q92544 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF4Q92544 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF4Q92544 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF4Q92544 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF4Q92544 AC002310.6-201ENST00000624451 1377 ntBASIC16.14■□□□□ 0.17
TM9SF4Q92544 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF4Q92544 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF4Q92544 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF4Q92544 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF4Q92544 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF4Q92544 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF4Q92544 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.14■□□□□ 0.17
TM9SF4Q92544 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.14■□□□□ 0.17
TM9SF4Q92544 CROCCP2-202ENST00000412962 2773 ntBASIC16.14■□□□□ 0.17
TM9SF4Q92544 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF4Q92544 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF4Q92544 AC211486.1-202ENST00000416371 468 ntBASIC16.14■□□□□ 0.17
TM9SF4Q92544 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.14■□□□□ 0.17
TM9SF4Q92544 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TM9SF4Q92544 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.14■□□□□ 0.17
TM9SF4Q92544 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.14■□□□□ 0.17
TM9SF4Q92544 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.14■□□□□ 0.17
TM9SF4Q92544 AC211476.1-201ENST00000503899 468 ntBASIC16.14■□□□□ 0.17
TM9SF4Q92544 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.14■□□□□ 0.17
TM9SF4Q92544 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.14■□□□□ 0.17
TM9SF4Q92544 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.14■□□□□ 0.17
TM9SF4Q92544 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.14■□□□□ 0.17
TM9SF4Q92544 AL121761.2-201ENST00000598007 1648 ntBASIC16.14■□□□□ 0.17
TM9SF4Q92544 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF4Q92544 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF4Q92544 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF4Q92544 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF4Q92544 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF4Q92544 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.14■□□□□ 0.17
TM9SF4Q92544 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TM9SF4Q92544 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.14■□□□□ 0.17
TM9SF4Q92544 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF4Q92544 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF4Q92544 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF4Q92544 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.14■□□□□ 0.17
TM9SF4Q92544 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
TM9SF4Q92544 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.13■□□□□ 0.17
TM9SF4Q92544 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TM9SF4Q92544 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF4Q92544 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF4Q92544 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
TM9SF4Q92544 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF4Q92544 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF4Q92544 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF4Q92544 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF4Q92544 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF4Q92544 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.13■□□□□ 0.17
TM9SF4Q92544 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF4Q92544 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF4Q92544 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF4Q92544 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.13■□□□□ 0.17
TM9SF4Q92544 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.13■□□□□ 0.17
TM9SF4Q92544 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TM9SF4Q92544 AC023274.1-201ENST00000418278 595 ntBASIC16.13■□□□□ 0.17
TM9SF4Q92544 PMS2P2-201ENST00000425039 1128 ntBASIC16.13■□□□□ 0.17
TM9SF4Q92544 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.13■□□□□ 0.17
TM9SF4Q92544 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TM9SF4Q92544 MIR4751-201ENST00000578027 74 ntBASIC16.13■□□□□ 0.17
TM9SF4Q92544 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TM9SF4Q92544 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.13■□□□□ 0.17
TM9SF4Q92544 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.13■□□□□ 0.17
TM9SF4Q92544 AC134684.3-201ENST00000641758 218 ntBASIC16.13■□□□□ 0.17
TM9SF4Q92544 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF4Q92544 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF4Q92544 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.13■□□□□ 0.17
TM9SF4Q92544 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF4Q92544 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.13■□□□□ 0.17
TM9SF4Q92544 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TM9SF4Q92544 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF4Q92544 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TM9SF4Q92544 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TM9SF4Q92544 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TM9SF4Q92544 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF4Q92544 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.13■□□□□ 0.17
TM9SF4Q92544 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF4Q92544 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF4Q92544 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF4Q92544 AC018695.7-201ENST00000624587 2492 ntBASIC16.12■□□□□ 0.17
TM9SF4Q92544 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TM9SF4Q92544 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TM9SF4Q92544 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TM9SF4Q92544 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF4Q92544 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF4Q92544 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.12■□□□□ 0.17
TM9SF4Q92544 AC004817.3-201ENST00000602957 2129 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms