Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 AC022494.1-201ENST00000466044 728 ntBASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 AC107918.2-201ENST00000530817 355 ntBASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 AC006213.4-201ENST00000616184 634 ntBASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SNIP1Q8TAD8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 AL096828.2-201ENST00000567259 1965 ntBASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 KRT17P7-201ENST00000451704 1104 ntBASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.04■□□□□ 0.16
SNIP1Q8TAD8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SNIP1Q8TAD8 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNIP1Q8TAD8 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNIP1Q8TAD8 CU639417.3-201ENST00000624240 1404 ntBASIC16.03■□□□□ 0.16
SNIP1Q8TAD8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.03■□□□□ 0.16
SNIP1Q8TAD8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SNIP1Q8TAD8 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNIP1Q8TAD8 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SNIP1Q8TAD8 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.03■□□□□ 0.16
SNIP1Q8TAD8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNIP1Q8TAD8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNIP1Q8TAD8 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SNIP1Q8TAD8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SNIP1Q8TAD8 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNIP1Q8TAD8 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNIP1Q8TAD8 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SNIP1Q8TAD8 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNIP1Q8TAD8 ARSEP1-201ENST00000420443 635 ntBASIC16.03■□□□□ 0.16
SNIP1Q8TAD8 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SNIP1Q8TAD8 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.03■□□□□ 0.16
SNIP1Q8TAD8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNIP1Q8TAD8 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNIP1Q8TAD8 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNIP1Q8TAD8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNIP1Q8TAD8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNIP1Q8TAD8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms