Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 AC006504.4-201ENST00000592118 1568 ntBASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDH19Q8TAB3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 HLA-A-201ENST00000376802 1334 ntBASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 PTCHD3P3-201ENST00000403073 906 ntBASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 PAWRP1-201ENST00000451083 565 ntBASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 AC107918.4-202ENST00000641623 219 ntBASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDH19Q8TAB3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.58■□□□□ 0.41
PCDH19Q8TAB3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH19Q8TAB3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.58■□□□□ 0.41
PCDH19Q8TAB3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH19Q8TAB3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH19Q8TAB3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH19Q8TAB3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH19Q8TAB3 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.58■□□□□ 0.41
PCDH19Q8TAB3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
PCDH19Q8TAB3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PCDH19Q8TAB3 AC124067.4-201ENST00000519691 2379 ntBASIC17.58■□□□□ 0.41
PCDH19Q8TAB3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.58■□□□□ 0.41
PCDH19Q8TAB3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.58■□□□□ 0.41
PCDH19Q8TAB3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
PCDH19Q8TAB3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH19Q8TAB3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDH19Q8TAB3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH19Q8TAB3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDH19Q8TAB3 ELK2BP-201ENST00000415014 1224 ntBASIC17.58■□□□□ 0.4
PCDH19Q8TAB3 LAGE3P1-201ENST00000425356 484 ntBASIC17.58■□□□□ 0.4
PCDH19Q8TAB3 RPS2P1-201ENST00000434010 821 ntBASIC17.58■□□□□ 0.4
PCDH19Q8TAB3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
PCDH19Q8TAB3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH19Q8TAB3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH19Q8TAB3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDH19Q8TAB3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDH19Q8TAB3 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDH19Q8TAB3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.58■□□□□ 0.4
PCDH19Q8TAB3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms