Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC22.35■■□□□ 1.17
COL22A1Q8NFW1 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL22A1Q8NFW1 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL22A1Q8NFW1 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC22.35■■□□□ 1.17
COL22A1Q8NFW1 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC22.35■■□□□ 1.17
COL22A1Q8NFW1 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC22.35■■□□□ 1.17
COL22A1Q8NFW1 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC22.35■■□□□ 1.17
COL22A1Q8NFW1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL22A1Q8NFW1 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
COL22A1Q8NFW1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL22A1Q8NFW1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL22A1Q8NFW1 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
COL22A1Q8NFW1 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL22A1Q8NFW1 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC22.34■■□□□ 1.17
COL22A1Q8NFW1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.34■■□□□ 1.17
COL22A1Q8NFW1 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC22.34■■□□□ 1.17
COL22A1Q8NFW1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL22A1Q8NFW1 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL22A1Q8NFW1 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC22.34■■□□□ 1.17
COL22A1Q8NFW1 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC22.34■■□□□ 1.17
COL22A1Q8NFW1 MEP1AP4-201ENST00000423244 1087 ntBASIC22.34■■□□□ 1.17
COL22A1Q8NFW1 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC22.34■■□□□ 1.17
COL22A1Q8NFW1 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC22.34■■□□□ 1.17
COL22A1Q8NFW1 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC22.34■■□□□ 1.17
COL22A1Q8NFW1 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC22.34■■□□□ 1.17
COL22A1Q8NFW1 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC22.34■■□□□ 1.17
COL22A1Q8NFW1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC22.34■■□□□ 1.17
COL22A1Q8NFW1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL22A1Q8NFW1 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC22.34■■□□□ 1.17
COL22A1Q8NFW1 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
COL22A1Q8NFW1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL22A1Q8NFW1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC22.33■■□□□ 1.17
COL22A1Q8NFW1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC22.33■■□□□ 1.17
COL22A1Q8NFW1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
COL22A1Q8NFW1 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL22A1Q8NFW1 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC22.33■■□□□ 1.17
COL22A1Q8NFW1 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
COL22A1Q8NFW1 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC22.33■■□□□ 1.17
COL22A1Q8NFW1 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
COL22A1Q8NFW1 RHOA-206ENST00000454011 889 ntTSL 2 BASIC22.33■■□□□ 1.17
COL22A1Q8NFW1 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
COL22A1Q8NFW1 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
COL22A1Q8NFW1 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC22.33■■□□□ 1.17
COL22A1Q8NFW1 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
COL22A1Q8NFW1 PDIA3P1-201ENST00000471856 1510 ntBASIC22.33■■□□□ 1.17
COL22A1Q8NFW1 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC22.33■■□□□ 1.17
COL22A1Q8NFW1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
COL22A1Q8NFW1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL22A1Q8NFW1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL22A1Q8NFW1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
COL22A1Q8NFW1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC22.33■■□□□ 1.16
COL22A1Q8NFW1 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
COL22A1Q8NFW1 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC22.33■■□□□ 1.16
COL22A1Q8NFW1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
COL22A1Q8NFW1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.33■■□□□ 1.16
COL22A1Q8NFW1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
COL22A1Q8NFW1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COL22A1Q8NFW1 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COL22A1Q8NFW1 AC099336.1-201ENST00000417053 1171 ntBASIC22.32■■□□□ 1.16
COL22A1Q8NFW1 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC22.32■■□□□ 1.16
COL22A1Q8NFW1 AC098859.1-201ENST00000502915 1238 ntBASIC22.32■■□□□ 1.16
COL22A1Q8NFW1 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC22.32■■□□□ 1.16
COL22A1Q8NFW1 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC22.32■■□□□ 1.16
COL22A1Q8NFW1 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC22.32■■□□□ 1.16
COL22A1Q8NFW1 NAA38-207ENST00000576861 556 ntTSL 3 BASIC22.32■■□□□ 1.16
COL22A1Q8NFW1 AL391069.4-201ENST00000609583 481 ntBASIC22.32■■□□□ 1.16
COL22A1Q8NFW1 AL139099.5-201ENST00000635274 300 ntBASIC22.32■■□□□ 1.16
COL22A1Q8NFW1 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC22.32■■□□□ 1.16
COL22A1Q8NFW1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
COL22A1Q8NFW1 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL22A1Q8NFW1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC22.32■■□□□ 1.16
COL22A1Q8NFW1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC22.32■■□□□ 1.16
COL22A1Q8NFW1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL22A1Q8NFW1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
COL22A1Q8NFW1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COL22A1Q8NFW1 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC22.32■■□□□ 1.16
COL22A1Q8NFW1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC22.32■■□□□ 1.16
COL22A1Q8NFW1 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC22.31■■□□□ 1.16
COL22A1Q8NFW1 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
COL22A1Q8NFW1 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC22.31■■□□□ 1.16
COL22A1Q8NFW1 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
COL22A1Q8NFW1 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC22.31■■□□□ 1.16
COL22A1Q8NFW1 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL22A1Q8NFW1 AC108725.1-201ENST00000495472 409 ntBASIC22.31■■□□□ 1.16
COL22A1Q8NFW1 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL22A1Q8NFW1 MIR8072-201ENST00000614241 80 ntBASIC22.31■■□□□ 1.16
COL22A1Q8NFW1 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC22.31■■□□□ 1.16
COL22A1Q8NFW1 AL033527.5-202ENST00000641632 1098 ntBASIC22.31■■□□□ 1.16
COL22A1Q8NFW1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL22A1Q8NFW1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL22A1Q8NFW1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC22.31■■□□□ 1.16
COL22A1Q8NFW1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
COL22A1Q8NFW1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC22.31■■□□□ 1.16
COL22A1Q8NFW1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC22.31■■□□□ 1.16
COL22A1Q8NFW1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL22A1Q8NFW1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC22.31■■□□□ 1.16
COL22A1Q8NFW1 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL22A1Q8NFW1 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL22A1Q8NFW1 APOC3-202ENST00000375345 604 ntTSL 5 BASIC22.31■■□□□ 1.16
COL22A1Q8NFW1 STX1A-203ENST00000395155 783 ntTSL 2 BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms