Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 SIGLEC16-201ENST00000599858 1437 ntBASIC17.4■□□□□ 0.38
DNAAF3Q8N9W5 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.4■□□□□ 0.38
DNAAF3Q8N9W5 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DNAAF3Q8N9W5 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DNAAF3Q8N9W5 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DNAAF3Q8N9W5 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
DNAAF3Q8N9W5 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DNAAF3Q8N9W5 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.4■□□□□ 0.38
DNAAF3Q8N9W5 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.4■□□□□ 0.38
DNAAF3Q8N9W5 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.4■□□□□ 0.38
DNAAF3Q8N9W5 ACTG1P4-201ENST00000425123 1122 ntBASIC17.4■□□□□ 0.38
DNAAF3Q8N9W5 HCG4P8-203ENST00000443049 980 ntBASIC17.4■□□□□ 0.38
DNAAF3Q8N9W5 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.4■□□□□ 0.38
DNAAF3Q8N9W5 MIR3652-201ENST00000579335 131 ntBASIC17.4■□□□□ 0.38
DNAAF3Q8N9W5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
DNAAF3Q8N9W5 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
DNAAF3Q8N9W5 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
DNAAF3Q8N9W5 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.4■□□□□ 0.38
DNAAF3Q8N9W5 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.4■□□□□ 0.38
DNAAF3Q8N9W5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DNAAF3Q8N9W5 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
DNAAF3Q8N9W5 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.4■□□□□ 0.38
DNAAF3Q8N9W5 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DNAAF3Q8N9W5 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DNAAF3Q8N9W5 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DNAAF3Q8N9W5 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DNAAF3Q8N9W5 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
DNAAF3Q8N9W5 AC079776.2-201ENST00000641154 1609 ntBASIC17.39■□□□□ 0.38
DNAAF3Q8N9W5 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
DNAAF3Q8N9W5 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
DNAAF3Q8N9W5 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
DNAAF3Q8N9W5 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.39■□□□□ 0.38
DNAAF3Q8N9W5 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
DNAAF3Q8N9W5 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.39■□□□□ 0.37
DNAAF3Q8N9W5 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF3Q8N9W5 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
DNAAF3Q8N9W5 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF3Q8N9W5 FRMD8P1-201ENST00000440433 1524 ntBASIC17.39■□□□□ 0.37
DNAAF3Q8N9W5 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF3Q8N9W5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF3Q8N9W5 NUS1P1-201ENST00000446295 882 ntBASIC17.39■□□□□ 0.37
DNAAF3Q8N9W5 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.39■□□□□ 0.37
DNAAF3Q8N9W5 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
DNAAF3Q8N9W5 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF3Q8N9W5 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF3Q8N9W5 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF3Q8N9W5 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
DNAAF3Q8N9W5 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF3Q8N9W5 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
DNAAF3Q8N9W5 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF3Q8N9W5 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.39■□□□□ 0.37
DNAAF3Q8N9W5 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF3Q8N9W5 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF3Q8N9W5 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF3Q8N9W5 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF3Q8N9W5 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.39■□□□□ 0.37
DNAAF3Q8N9W5 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF3Q8N9W5 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
DNAAF3Q8N9W5 AP005117.1-201ENST00000584346 1413 ntBASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 AC004817.3-201ENST00000602957 2129 ntBASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 AP001269.4-201ENST00000609611 512 ntBASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 AC079328.2-201ENST00000561241 3354 ntBASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 FLJ38576-201ENST00000623820 2459 ntBASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF3Q8N9W5 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF3Q8N9W5 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF3Q8N9W5 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF3Q8N9W5 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.37■□□□□ 0.37
DNAAF3Q8N9W5 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF3Q8N9W5 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF3Q8N9W5 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms