Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.65■□□□□ 0.42
PHTF2Q8N3S3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHTF2Q8N3S3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHTF2Q8N3S3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.65■□□□□ 0.42
PHTF2Q8N3S3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PHTF2Q8N3S3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PHTF2Q8N3S3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHTF2Q8N3S3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHTF2Q8N3S3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PHTF2Q8N3S3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.64■□□□□ 0.42
PHTF2Q8N3S3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.64■□□□□ 0.42
PHTF2Q8N3S3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.64■□□□□ 0.42
PHTF2Q8N3S3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
PHTF2Q8N3S3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PHTF2Q8N3S3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 PI4KAP1-204ENST00000612579 1703 ntBASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 AL355312.1-201ENST00000407115 2176 ntBASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PHTF2Q8N3S3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 PAWRP1-201ENST00000451083 565 ntBASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 AL596442.2-201ENST00000610240 980 ntBASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 AL139327.4-201ENST00000612362 153 ntBASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 BCAR1-209ENST00000546196 1340 ntBASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 ELL2P1-201ENST00000413990 1906 ntBASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHTF2Q8N3S3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms