Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL161645.1-201ENST00000622716 1255 ntBASIC26.39■■□□□ 1.82
VPS8Q8N3P4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC26.39■■□□□ 1.82
VPS8Q8N3P4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
VPS8Q8N3P4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
VPS8Q8N3P4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
VPS8Q8N3P4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
VPS8Q8N3P4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
VPS8Q8N3P4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
VPS8Q8N3P4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC26.39■■□□□ 1.82
VPS8Q8N3P4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
VPS8Q8N3P4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
VPS8Q8N3P4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC26.39■■□□□ 1.81
VPS8Q8N3P4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
VPS8Q8N3P4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC26.39■■□□□ 1.81
VPS8Q8N3P4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
VPS8Q8N3P4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
VPS8Q8N3P4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC26.39■■□□□ 1.81
VPS8Q8N3P4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
VPS8Q8N3P4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC26.39■■□□□ 1.81
VPS8Q8N3P4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.81
VPS8Q8N3P4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.81
VPS8Q8N3P4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.81
VPS8Q8N3P4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC26.39■■□□□ 1.81
VPS8Q8N3P4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
VPS8Q8N3P4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC26.39■■□□□ 1.81
VPS8Q8N3P4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC26.39■■□□□ 1.81
VPS8Q8N3P4 AC243562.1-201ENST00000560672 389 ntBASIC26.39■■□□□ 1.81
VPS8Q8N3P4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
VPS8Q8N3P4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC26.39■■□□□ 1.81
VPS8Q8N3P4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC26.39■■□□□ 1.81
VPS8Q8N3P4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC26.39■■□□□ 1.81
VPS8Q8N3P4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC26.39■■□□□ 1.81
VPS8Q8N3P4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
VPS8Q8N3P4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
VPS8Q8N3P4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
VPS8Q8N3P4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
VPS8Q8N3P4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
VPS8Q8N3P4 AL391256.1-201ENST00000443260 1855 ntBASIC26.38■■□□□ 1.81
VPS8Q8N3P4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC26.38■■□□□ 1.81
VPS8Q8N3P4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
VPS8Q8N3P4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
VPS8Q8N3P4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC26.38■■□□□ 1.81
VPS8Q8N3P4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
VPS8Q8N3P4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC26.38■■□□□ 1.81
VPS8Q8N3P4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
VPS8Q8N3P4 RPS8P6-201ENST00000426177 609 ntBASIC26.38■■□□□ 1.81
VPS8Q8N3P4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC26.38■■□□□ 1.81
VPS8Q8N3P4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC26.38■■□□□ 1.81
VPS8Q8N3P4 AC021097.1-201ENST00000607902 574 ntBASIC26.38■■□□□ 1.81
VPS8Q8N3P4 AC009093.7-201ENST00000623853 1223 ntBASIC26.38■■□□□ 1.81
VPS8Q8N3P4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC26.38■■□□□ 1.81
VPS8Q8N3P4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
VPS8Q8N3P4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
VPS8Q8N3P4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC26.38■■□□□ 1.81
VPS8Q8N3P4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
VPS8Q8N3P4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
VPS8Q8N3P4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
VPS8Q8N3P4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC26.37■■□□□ 1.81
VPS8Q8N3P4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
VPS8Q8N3P4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
VPS8Q8N3P4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC26.37■■□□□ 1.81
VPS8Q8N3P4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC26.37■■□□□ 1.81
VPS8Q8N3P4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
VPS8Q8N3P4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
VPS8Q8N3P4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
VPS8Q8N3P4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
VPS8Q8N3P4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
VPS8Q8N3P4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
VPS8Q8N3P4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC26.37■■□□□ 1.81
VPS8Q8N3P4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC26.37■■□□□ 1.81
VPS8Q8N3P4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
VPS8Q8N3P4 TIMM8BP1-201ENST00000452384 211 ntBASIC26.37■■□□□ 1.81
VPS8Q8N3P4 AC079140.1-201ENST00000508039 487 ntBASIC26.37■■□□□ 1.81
VPS8Q8N3P4 AL596442.2-201ENST00000610240 980 ntBASIC26.37■■□□□ 1.81
VPS8Q8N3P4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
VPS8Q8N3P4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC26.37■■□□□ 1.81
VPS8Q8N3P4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
VPS8Q8N3P4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
VPS8Q8N3P4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
VPS8Q8N3P4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC26.36■■□□□ 1.81
VPS8Q8N3P4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
VPS8Q8N3P4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
VPS8Q8N3P4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
VPS8Q8N3P4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC26.36■■□□□ 1.81
VPS8Q8N3P4 TFAMP1-201ENST00000412727 736 ntBASIC26.36■■□□□ 1.81
VPS8Q8N3P4 AL627223.1-201ENST00000416693 442 ntBASIC26.36■■□□□ 1.81
VPS8Q8N3P4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC26.36■■□□□ 1.81
VPS8Q8N3P4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
VPS8Q8N3P4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC26.36■■□□□ 1.81
VPS8Q8N3P4 AC069335.1-201ENST00000489972 472 ntBASIC26.36■■□□□ 1.81
VPS8Q8N3P4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC26.36■■□□□ 1.81
VPS8Q8N3P4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC26.36■■□□□ 1.81
VPS8Q8N3P4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
VPS8Q8N3P4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
VPS8Q8N3P4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
VPS8Q8N3P4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
VPS8Q8N3P4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
VPS8Q8N3P4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
VPS8Q8N3P4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC26.36■■□□□ 1.81
VPS8Q8N3P4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms