Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC23.21■■□□□ 1.31
LTBP4Q8N2S1 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
LTBP4Q8N2S1 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
LTBP4Q8N2S1 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
LTBP4Q8N2S1 AC138028.6-201ENST00000616106 1482 ntBASIC23.21■■□□□ 1.31
LTBP4Q8N2S1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC23.21■■□□□ 1.31
LTBP4Q8N2S1 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC23.2■■□□□ 1.31
LTBP4Q8N2S1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.31
LTBP4Q8N2S1 SLC9A3P2-201ENST00000447821 2021 ntBASIC23.2■■□□□ 1.31
LTBP4Q8N2S1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LTBP4Q8N2S1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC23.2■■□□□ 1.3
LTBP4Q8N2S1 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
LTBP4Q8N2S1 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC23.2■■□□□ 1.3
LTBP4Q8N2S1 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC23.2■■□□□ 1.3
LTBP4Q8N2S1 AC098859.1-201ENST00000502915 1238 ntBASIC23.2■■□□□ 1.3
LTBP4Q8N2S1 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC23.2■■□□□ 1.3
LTBP4Q8N2S1 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC23.2■■□□□ 1.3
LTBP4Q8N2S1 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC23.2■■□□□ 1.3
LTBP4Q8N2S1 MIR3619-201ENST00000579667 83 ntBASIC23.2■■□□□ 1.3
LTBP4Q8N2S1 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
LTBP4Q8N2S1 AP001350.2-201ENST00000625104 1094 ntBASIC23.2■■□□□ 1.3
LTBP4Q8N2S1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
LTBP4Q8N2S1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC23.2■■□□□ 1.3
LTBP4Q8N2S1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LTBP4Q8N2S1 REXO1L11P-201ENST00000620964 1927 ntBASIC23.2■■□□□ 1.3
LTBP4Q8N2S1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.2■■□□□ 1.3
LTBP4Q8N2S1 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC23.2■■□□□ 1.3
LTBP4Q8N2S1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
LTBP4Q8N2S1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC23.2■■□□□ 1.3
LTBP4Q8N2S1 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 CDK2AP2P3-201ENST00000422476 372 ntBASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 AC005077.2-201ENST00000449786 690 ntBASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 HIST2H2BC-201ENST00000498492 580 ntBASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 ATF5-205ENST00000600336 682 ntTSL 2 BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 CU634019.7-201ENST00000624153 1185 ntBASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 FP236241.2-201ENST00000624906 1185 ntBASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 AL607033.1-201ENST00000623900 1599 ntBASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 AL442647.2-201ENST00000429864 857 ntBASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 AC079316.1-201ENST00000548397 411 ntBASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 SUOX-214ENST00000551841 906 ntTSL 3 BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 NAA38-207ENST00000576861 556 ntTSL 3 BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 CYP2A7P1-201ENST00000595391 815 ntBASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LTBP4Q8N2S1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
LTBP4Q8N2S1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LTBP4Q8N2S1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
LTBP4Q8N2S1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LTBP4Q8N2S1 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
LTBP4Q8N2S1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
LTBP4Q8N2S1 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC23.18■■□□□ 1.3
LTBP4Q8N2S1 KRT8P22-201ENST00000562317 1415 ntBASIC23.18■■□□□ 1.3
LTBP4Q8N2S1 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
LTBP4Q8N2S1 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LTBP4Q8N2S1 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC23.18■■□□□ 1.3
LTBP4Q8N2S1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
LTBP4Q8N2S1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
LTBP4Q8N2S1 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC23.18■■□□□ 1.3
LTBP4Q8N2S1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LTBP4Q8N2S1 ZBTB12BP-201ENST00000314232 1122 ntBASIC23.18■■□□□ 1.3
LTBP4Q8N2S1 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LTBP4Q8N2S1 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LTBP4Q8N2S1 MPV17-204ENST00000399052 749 ntTSL 4 BASIC23.18■■□□□ 1.3
LTBP4Q8N2S1 AC104596.2-201ENST00000512793 793 ntBASIC23.18■■□□□ 1.3
LTBP4Q8N2S1 KRT90P-201ENST00000549264 1064 ntBASIC23.18■■□□□ 1.3
LTBP4Q8N2S1 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
LTBP4Q8N2S1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC23.18■■□□□ 1.3
LTBP4Q8N2S1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
LTBP4Q8N2S1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LTBP4Q8N2S1 HARS-202ENST00000415192 1401 ntTSL 2 BASIC23.17■■□□□ 1.3
LTBP4Q8N2S1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LTBP4Q8N2S1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC23.17■■□□□ 1.3
LTBP4Q8N2S1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LTBP4Q8N2S1 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC23.17■■□□□ 1.3
LTBP4Q8N2S1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LTBP4Q8N2S1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
LTBP4Q8N2S1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC23.17■■□□□ 1.3
LTBP4Q8N2S1 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms