Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 AD000864.1-201ENST00000624076 2295 ntBASIC16.48■□□□□ 0.23
KRT78Q8N1N4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KRT78Q8N1N4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 AL590787.1-201ENST00000568856 1315 ntBASIC16.47■□□□□ 0.23
KRT78Q8N1N4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 LAGE3P1-201ENST00000425356 484 ntBASIC16.47■□□□□ 0.23
KRT78Q8N1N4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 EMBP1-201ENST00000458200 901 ntBASIC16.47■□□□□ 0.23
KRT78Q8N1N4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.47■□□□□ 0.23
KRT78Q8N1N4 AC006557.2-201ENST00000592985 1240 ntBASIC16.47■□□□□ 0.23
KRT78Q8N1N4 AL121912.1-201ENST00000603683 238 ntBASIC16.47■□□□□ 0.23
KRT78Q8N1N4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
KRT78Q8N1N4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 FAAHP1-202ENST00000446499 1238 ntBASIC16.46■□□□□ 0.23
KRT78Q8N1N4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 AC025062.2-201ENST00000605477 670 ntBASIC16.46■□□□□ 0.23
KRT78Q8N1N4 AC004706.3-202ENST00000621574 984 ntBASIC16.46■□□□□ 0.23
KRT78Q8N1N4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KRT78Q8N1N4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.46■□□□□ 0.22
KRT78Q8N1N4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
KRT78Q8N1N4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.46■□□□□ 0.22
KRT78Q8N1N4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
KRT78Q8N1N4 TUBB8P12-201ENST00000308911 1335 ntBASIC16.45■□□□□ 0.22
KRT78Q8N1N4 TUBB7P-202ENST00000428444 1305 ntBASIC16.45■□□□□ 0.22
KRT78Q8N1N4 TUBB8P7-204ENST00000567960 1332 ntBASIC16.45■□□□□ 0.22
KRT78Q8N1N4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.45■□□□□ 0.22
KRT78Q8N1N4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms