Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 AC099398.1-201ENST00000567919 2776 ntBASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CCDC116Q8IYX3 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.08■□□□□ 0.17
CCDC116Q8IYX3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC116Q8IYX3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC116Q8IYX3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CCDC116Q8IYX3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.08■□□□□ 0.17
CCDC116Q8IYX3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CCDC116Q8IYX3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC116Q8IYX3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC116Q8IYX3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC116Q8IYX3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.08■□□□□ 0.16
CCDC116Q8IYX3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC116Q8IYX3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.08■□□□□ 0.16
CCDC116Q8IYX3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC116Q8IYX3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.08■□□□□ 0.16
CCDC116Q8IYX3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.08■□□□□ 0.16
CCDC116Q8IYX3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC116Q8IYX3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.08■□□□□ 0.16
CCDC116Q8IYX3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC116Q8IYX3 AC025062.2-201ENST00000605477 670 ntBASIC16.08■□□□□ 0.16
CCDC116Q8IYX3 AL139424.1-201ENST00000607572 797 ntBASIC16.08■□□□□ 0.16
CCDC116Q8IYX3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC116Q8IYX3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC116Q8IYX3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC116Q8IYX3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC116Q8IYX3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC116Q8IYX3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CCDC116Q8IYX3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC116Q8IYX3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC116Q8IYX3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CCDC116Q8IYX3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC116Q8IYX3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.08■□□□□ 0.16
CCDC116Q8IYX3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 AC084018.2-201ENST00000613093 2607 ntBASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 AC004706.3-202ENST00000621574 984 ntBASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 AGGF1P2-201ENST00000426656 2106 ntBASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC116Q8IYX3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms