Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 STK33P1-201ENST00000423835 1218 ntBASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 AC009947.1-201ENST00000444350 727 ntBASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 AC108073.2-201ENST00000464002 357 ntBASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 AC108751.1-201ENST00000490852 363 ntBASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 SLC25A6P2-201ENST00000497974 877 ntBASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 DUX4L17-201ENST00000557360 1267 ntBASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 AC005915.1-201ENST00000624912 2018 ntBASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCUBE3Q8IX30 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 AC104109.2-201ENST00000602919 1418 ntBASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 AC092183.1-201ENST00000469884 875 ntBASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 SLC25A1P1-201ENST00000528351 927 ntBASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 Z83851.2-201ENST00000609564 659 ntBASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 PCDHB17P-201ENST00000539533 2393 ntBASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 AC002310.6-201ENST00000624451 1377 ntBASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCUBE3Q8IX30 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
SCUBE3Q8IX30 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SCUBE3Q8IX30 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
SCUBE3Q8IX30 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
SCUBE3Q8IX30 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCUBE3Q8IX30 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SCUBE3Q8IX30 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCUBE3Q8IX30 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCUBE3Q8IX30 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SCUBE3Q8IX30 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.89■□□□□ 0.45
SCUBE3Q8IX30 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.89■□□□□ 0.45
SCUBE3Q8IX30 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SCUBE3Q8IX30 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.89■□□□□ 0.45
SCUBE3Q8IX30 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
SCUBE3Q8IX30 AC145285.3-201ENST00000564603 959 ntBASIC17.89■□□□□ 0.45
SCUBE3Q8IX30 OR7E47P-204ENST00000575924 449 ntBASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms