Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 TIMM8BP1-201ENST00000452384 211 ntBASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC62Q6P9F0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 EGFEM1P-202ENST00000431685 1563 ntBASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 AL627223.1-201ENST00000416693 442 ntBASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 AC243562.1-201ENST00000560672 389 ntBASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC62Q6P9F0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 AC004449.1-201ENST00000564240 433 ntBASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC62Q6P9F0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CCDC62Q6P9F0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CCDC62Q6P9F0 AC016396.2-201ENST00000562575 1417 ntBASIC19.08■□□□□ 0.65
CCDC62Q6P9F0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.08■□□□□ 0.65
CCDC62Q6P9F0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC62Q6P9F0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC62Q6P9F0 FZD10-202ENST00000539839 3282 ntBASIC19.08■□□□□ 0.65
CCDC62Q6P9F0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CCDC62Q6P9F0 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC62Q6P9F0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC62Q6P9F0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CCDC62Q6P9F0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC62Q6P9F0 AL133373.2-201ENST00000623187 2828 ntBASIC19.08■□□□□ 0.65
CCDC62Q6P9F0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC62Q6P9F0 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
CCDC62Q6P9F0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CCDC62Q6P9F0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms